Protein: | alp4 |
Organism: | Schizosaccharomyces pombe |
Length: | 784 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for alp4.
Description | E-value | Query Range |
Subject Range |
|
609.0 | [0..6] | [783..109] |
|
605.0 | [0..3] | [783..158] |
|
595.0 | [0..3] | [783..63] |
|
593.0 | [0..7] | [762..103] |
|
586.0 | [0..3] | [783..108] |
|
581.0 | [0..6] | [738..114] |
|
580.0 | [0..6] | [783..72] |
|
580.0 | [0..3] | [783..99] |
|
561.0 | [0..24] | [782..129] |
|
552.0 | [0..6] | [783..117] |
Region A: Residues: [1-245] |
1 11 21 31 41 51 | | | | | | 1 MVRSISSVLA KEESENGSPI PALEEGSVYH VSLKSEGVSP FSDRIQLNYL YDGKTFSDPS 60 61 NLNIHQQEAC LINELLNAFM GMEGVFVHLQ DMKASSEFET IIMPPSFYIL PGFDLGIKDI 120 121 ASEMLEMGSH YLSITAFIES RSHFEYGFVN HALCAALRKF VMDYVVLIMQ CENQSRIDPN 180 181 FSLQTLRLYT LPTSRSLRQV YLILRDLLLS MEKNASSSDD LGLSNIDDLL EQLNEGNDIS 240 241 HVVNA |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [246-393] |
1 11 21 31 41 51 | | | | | | 1 TRSKKKVCKG GQVISFLTES LTKYAGDPVA RKILTYLLRE ASRPYTKMLN EWIHLGLVND 60 61 PYDEFMIKIH KGITSMQLDE DYTDEYWEKR YVIREDQVPP QLLDLQNKVL FAGKYLNVVL 120 121 ECRKGVNNLA SLNAKDDTQN QLLWPSTF |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.689 | 0.302 | microtubule nucleation | a.25.1 | Ferritin-like |
View | Download | 0.486 | 0.012 | microtubule nucleation | a.24.17 | Group V grass pollen allergen |
View | Download | 0.517 | 0.006 | microtubule nucleation | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
View | Download | 0.556 | N/A | N/A | a.25.1 | Ferritin-like |
View | Download | 0.511 | N/A | N/A | a.25.1 | Ferritin-like |
Region A: Residues: [394-530] |
1 11 21 31 41 51 | | | | | | 1 DDDNFTLNIM NAYVYANESL LQLLQSSQSL YAHLYSLKHY FFLDQSDFFT TFLDNAQHEL 60 61 RKPAKYISIT KLQSQLDLAL RQPGTITATD PHKEYVTVEV NQTSLIDWLM HIVSISGLEE 120 121 GTSSQGNEVW NESITKQ |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.517 | 0.143 | microtubule nucleation | a.118.8 | TPR-like |
View | Download | 0.366 | 0.007 | microtubule nucleation | a.72.1 | Functional domain of the splicing factor Prp18 |
View | Download | 0.454 | N/A | N/A | d.92.2 | beta-N-acetylhexosaminidase-like domain |
View | Download | 0.371 | N/A | N/A | a.118.8 | TPR-like |
View | Download | 0.352 | N/A | N/A | a.118.8 | TPR-like |
Region A: Residues: [531-784] |
1 11 21 31 41 51 | | | | | | 1 ADVGNETRNF ESEHNRSTQG TSKVGSDKDI NGFETMQLCY KVPFPLSLIL SRKAIIRYQL 60 61 LFRYFLLLRH VEMQLENSWV QHSKNSAWRL NSSNAKIEQW KRNSWLLRTR MLSFVQKIIY 120 121 YTTSEVIETH WGKFMGELEN ARTVDNLMQE HIDFLDTCLK ECMLTNSRLL KVQSKLLNTC 180 181 AMFASYTSTF TRSLYLLENS EESFDEGRMD KMEEILRRYE DSFSRHLKSL VNACNYFAST 240 241 ETAALLSLVM KLTG |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.