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View Structure Prediction Details

Protein: FBpp0311835, CG3...
Organism: Drosophila melanogaster
Length: 520 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0311835, CG3....

Description E-value Query
Range
Subject
Range
gi|38080173, gi|... - gi|82964770|ref|XP_913425.1| PREDICTED: similar to Tektin-3 [Mus musculus], gi|38080173|ref|XP_35876...
238.0 [0..19] [518..7]

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Predicted Domain #1
Region A:
Residues: [1-117]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHNGAGLGA GSGGSPIPPT TVMYSQLQPW SQAGAPPCME PVMGPSIPPR VGAAYETPTK  60
   61 HPWRPAMAYE LIQVKHMPEQ PVTNQLTKQC FLPKGMKTDG MIFPNLVTGF DRNPQHA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [118-520]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ARAALYTRYT SNEWYNNNMT KYSESNMNRN LSERMRNDAV RLMRETDEKA TSGQRDAGRR  60
   61 LGERITDLTF WRNELNAELE KLIAEMSDIN ELQRQCGKAL LDLEIPLHIA QECLFHRESR 120
  121 QGTEKVHDIV EKALLVEINN LRNSRDRLGG LHEKISKQAL DCRGAQHLLE DDVSHKESSL 180
  181 GIDSMCHQLN NHSRGITYYG GIEKFDPSVS TQESWAQASS EHVRRSQAER AKLSQLRSDA 240
  241 QSVVNSVATT VWDFWSNTNN AFDRRSQEMA EAKNRVQLHL QKVQQELFDM EKHLFLLQKA 300
  301 IQDKSGPLKV AQTRLEARSH REGVELCKDH AQDRLVQEVQ DIQGAVETLH HKLMEAEATH 360
  361 QGLLKTRCTL EVDLRNKVNA LFIDREKCMS LRRSFPVSNL IKY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.0
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle