Protein: | Grip84-PA |
Organism: | Drosophila melanogaster |
Length: | 926 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Grip84-PA.
Description | E-value | Query Range |
Subject Range |
|
659.0 | [0..76] | [926..2] |
Region A: Residues: [1-307] |
1 11 21 31 41 51 | | | | | | 1 MSKPHALRGV LANLISESQS PLTPESIIRE FRATSDRRLP ACDLIKVLVS ISEKRPNFAE 60 61 VTKEISHILQ NKDPMYALLV FVERYSECKP VSESSSSTSL SAMGLPHGNK TSDVNSAAGS 120 121 VPTTLAIAST STILTTSQNV SGSTRLSLTQ SQDFPTSTPV NCKKATESDT TPVVFVRRGP 180 181 MDRNRGAGKD ERNDLSVIKE RVLNAVSDQS LSGYRSVTNK TGNSPKSMPN DLVTLTDVPD 240 241 EYRTHLLWEY YKVDGDKVPR AEIAAMPLLS QESMLLDELL HCLTGIRESL LVPQKPIISA 300 301 VGLAKYD |
Detection Method: | |
Confidence: | 2.06 |
Match: | 1h1kI |
Description: | THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [308-467] |
1 11 21 31 41 51 | | | | | | 1 TDFDIHTHLD RSLTHQVREI LPLASYFMGV QKIIAATDGL GQVMNSLNEA LQELTHDFYL 60 61 IIVQAEQELR HNRLTLQKLL YYLQPTMWVM HEVWSSLVII QLSDSRDAEV LTYLHERIKR 120 121 LEGNKDAQQL IIGLVRKAAK PYMRMLQMWI QKGVIVDRHR |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [468-664] |
1 11 21 31 41 51 | | | | | | 1 EFLVVDNEVI HRDELPEHYS DDYWERRYTL RDEQIPSFLA KYSDKILRTG KYLNVIRQCG 60 61 KRVMPTQEMN LEFDPTSERH VSVINDAYYF AARMLLDVLL TENDLMGHLQ SVKRYLLLNQ 120 121 GDFTMQFMDA CEDELTKNVD HVLPMTLENL LGLTLRISSA RNDPYKDDLH CELLPYDLVT 180 181 QMSKIMKKEE NWQAQPR |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [665-769] |
1 11 21 31 41 51 | | | | | | 1 LDLSGLECFA FTYEVKWPCS LVLNHISISK YQMLFRQLFY CKHVERQLCK IWKENSIARQ 60 61 FEPQAASLYR AAFTLRQRMM NAIQNLEYYM MIEIIEPNWH IFIEK |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.855 | 0.034 | microtubule nucleation | a.24.14 | FAT domain of focal adhesion kinase |
Region A: Residues: [770-926] |
1 11 21 31 41 51 | | | | | | 1 MKTVENVDNV LRLHQDFLDS CLKNCMLTES SHLNRSIFKL CKICLKYCEF IQITQRYFQD 60 61 AELRSMVRDS ADSSESEQES LHCPQIETPL DPTDTFSERV RRFDLEFTQL LISFLKQINS 120 121 MAKKNTADCF MNLVHRINFN AFYTDQMDKM CVEDAIG |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.