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View Structure Prediction Details

Protein: CG12203-PA
Organism: Drosophila melanogaster
Length: 183 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG12203-PA.

Description E-value Query
Range
Subject
Range
gi|125983438|ref... - GA11474-PA [Drosophila pseudoobscura], GA11474 [Drosophila pseudoobscura pseudoobscura]
gi|125983438, gi... - gi|54643800|gb|EAL32543.1| GA11474 [Drosophila pseudoobscura pseudoobscura], gi|125983438|ref|XP_001...
gi|194104862, gi... - gi|195164004|ref|XP_002022839.1| GL14531 [Drosophila persimilis], gi|194104862|gb|EDW26905.1| GL1453...
260.0 [0..1] [183..1]

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Predicted Domain #1
Region A:
Residues: [1-62]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSALRQVMCR STASLQLYQA NRAAAARWAS TATDGGPLDP KTALARPEEL EQRNKLSGKI  60
   61 TV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [63-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTAVNLSPIS GVPEEHIRER RVRIHIPPKN AMQSGTDNVN TWQIEFDNRE RWENPLMGWA  60
   61 SSGDPLSNMN VQFGSPEEAI TFCERNGWRW YVDGAAKPKK ERVKNYGINF AWNKRTRVST 120
  121 K

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 41.769551
Match: PF04800.3
Description: No description for PF04800.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle