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View Structure Prediction Details

Protein: gi|24643132, gi|...
Organism: Drosophila melanogaster
Length: 608 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24643132, gi|....

Description E-value Query
Range
Subject
Range
gi|39592304, gi|... - gi|39592304|emb|CAE75525.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae], gi|187020927|em...
gi|157762282 - gi|157762282|ref|XP_001673483.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae AF16]
259.0 [0..41] [607..1033]

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Predicted Domain #1
Region A:
Residues: [1-151]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPLSPLRSC LPRLSSRLHQ LSSNIHCFNR CYARMFAVVI LCVLFCTIYV PFRHKINMAD  60
   61 LTCSFPDASP MRLLPFSITN CTYAYIETPK TKTTVLDATE STSSSTALAA AASSAVCPWD 120
  121 DPAESVPPPP PPAQVKLSVC PWELDSATET P

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [152-316]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TAAPAVGSGG GGAGASKILS STGQPMRLNS TSSDNSDVND RMQRNLGIRH QNTVDSGEAG  60
   61 IKRLIPNIPE QRRASVSFTP SPTPDFQLGR TPTTTSSPTV APSSSTPLQA RSAVYGSGQG 120
  121 IAKDPPSGSD VDAELEEELN KISLGESSIS EPPLLVVPTP EQTPP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [317-406]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PITKITPPPG ESENQADQVI DSTEIPGSSC STQANQFGEA TATVTTVKEV QIELIEQVSG  60
   61 VQTEPDSPPT IKVLVLEATT PVSAETATAD 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [407-528]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGENLAKMAT ASNTTTITTD DQAMRADDDA ERAAEIEQTV LDELSPTTDE YQEFGDAKDA  60
   61 VDDFDSIDIG YIPPAPTPAP SMAPLAELDV DTVDDEPCEP AAPPPSHSAP ASSSSRELVM 120
  121 AS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [529-608]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSVTATPTSS NEEARKRRKK RNSEGKKLSS QDDKDKDAHE RAGGSSMDAA DHNAVCPWED  60
   61 ENVSTNDGTF VKTYATLGYL 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle