| Protein: | CG6540-PA |
| Organism: | Drosophila melanogaster |
| Length: | 331 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6540-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
167.0 | [0..1] | [315..1437] |
|
Region A: Residues: [1-105] |
1 11 21 31 41 51
| | | | | |
1 MEPMNLGSPV NSPGSNQTQY LPPFLLGDPQ GITPHKNTLS PKTGRSNISF ATSPGGSSPH 60
61 ELNRSALSTR TLFAAQGGAH TAVGANSSTT AHGQTHSHHQ TGPPT
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [106-331] |
1 11 21 31 41 51
| | | | | |
1 QGLFDSLREQ SVTPKKKNHL GMLQLQSPNQ SYQSSYHTND SFAPGAPNAI NASMRALCSP 60
61 LGATASPAGG LGTSVTTGGN SRLSDFWVTI FGFPPGAGSM VLQHFTVCGT IVDVVHAPQN 120
121 GNWMYVRYSS RIESDKALNY NEKIIAGNVM VGVSRCTDRS VIDKENIGSV PNAEIGDPPT 180
181 SPSAIRPFSQ QSYKLARKDN IISPQKDVPQ KSSGLMDKAM DLIFGW
|
| Detection Method: | |
| Confidence: | 19.522879 |
| Match: | 1wwhA |
| Description: | Crystal structure of the MPPN domain of mouse Nup35 |
Matching Structure (courtesy of the PDB): |
|
