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View Structure Prediction Details

Protein: dik-PA
Organism: Drosophila melanogaster
Length: 556 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dik-PA.

Description E-value Query
Range
Subject
Range
gi|54643142, gi|... - gi|54643142|gb|EAL31886.1| GA20099-PA [Drosophila pseudoobscura], gi|125981655|ref|XP_001354831.1| G...
487.0 [0..1] [551..1]

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Predicted Domain #1
Region A:
Residues: [1-251]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSANLKNIKL AHFSGSLGSG GFGISASSGG AGKLPTNGTG GGKSAPTSTF LDSEVLATPG  60
   61 GVVIPIIRTR DVPKLLPTIA AALQRPADDH LAAEDLDAVQ LELEQMLSNV ALRTRVLKAE 120
  121 YDSLDKDEKR QDRRKLDRVP GSPPCPASML NGLLGIGSNS STSLGSPLGG GGASSSSQSK 180
  181 RKRDEPTGVR KKHSSMTILK QQGVSGGTSK HQAKNSPLVV HTDDSMDYLP TLAAANASGS 240
  241 VLPHHQPLPQ L

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [252-326]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKMTVPKNDT PNKFWLSVEP YCMPLTNEDL RLIDDLLEQY WGPLVPPVPP LGPHYSTVWA  60
   61 QEDIKALQPG GARIK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [327-556]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNNSSGMLKK AEGMVDESIT GPLTQRLVSA LMEESLMTLP SEQAAVGEHS NSTTSSSNEN  60
   61 THSHSSSSAN AAAAAASGNF RSLAMMKHGV GIEQRLKKTL IENGLIDASE FAAHEDVDEV 120
  121 LMEIKRVTTE ISTISQFNSE ELKRLRAVAS EEIKRIAIKQ KLDMVDQEIL ECYKRMLQYR 180
  181 AKRKGHTIEE KQEILRLTNE QRLLADQLER MQMHLPCIGG SGNSLLEPKM 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle