YRC Public Data Repository - Protein Structure Prediction

Protein:	CG7772-PA
Organism:	Drosophila melanogaster
Length:	164 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG7772-PA.

Description	E-value	Query Range	Subject Range
gi\|55233756, gi\|... - gi\|58395802\|ref\|XP_321500.2\| AGAP001603-PA [Anopheles gambiae str. PEST], gi\|55233756\|gb\|EAA01350.3\|... gi\|21436531, gi\|... - gi\|21436531\|emb\|CAD29635.1\| putative protein [Anopheles gambiae], gi\|19572988\|emb\|CAD28128.1\| putati...	236.0	[0..19]	[164..1]
CE30453 - WBGene00000245 locus:bca-1 status:Confirmed TR:Q8T3C8 protein_id:AAM15604.1	231.0	[0..18]	[161..1]
gi\|55741522 - ref\|NP_001006961.1\| similar to hypothetical protein HSPC242 [Rattus norvegicus] gi\|53733512, gi\|... - gi\|55741522\|ref\|NP_001006961.1\| mitochondrial protein 18 kDa [Rattus norvegicus], gi\|53733512\|gb\|AAH...	227.0	[0..21]	[161..8]
gi\|31455234, gi\|... - gi\|6624131\|gb\|AAF19257.1\|AC004832_2 similar to T13C5.6 gene product [Caenorhabditis elegans]; simila... gi\|109451252, gi... - gi\|109451830\|emb\|CAK54786.1\| Em:AC004832.C22.1 [synthetic construct], gi\|109451252\|emb\|CAK54487.1\| E... MIM:610235\|Ensem... - protein 18 kDa ENSPTRT00000044457 - null	223.0	[0..23]	[161..10]
gi\|73995426 - gi\|73995426\|ref\|XP_543478.2\| PREDICTED: similar to mitochondrial protein 18 kDa isoform a [Canis fam...	220.0	[0..23]	[161..10]
MTFP1_MOUSE - Mitochondrial fission process protein 1 OS=Mus musculus GN=Mtfp1 PE=1 SV=1	220.0	[0..23]	[161..10]
gi\|111308589, gi... - gi\|115497128\|ref\|NP_001069331.1\| mitochondrial protein 18 kDa [Bos taurus], gi\|111308589\|gb\|AAI20146...	216.0	[0..23]	[161..10]
gi\|114685850 - gi\|114685850\|ref\|XP_001142360.1\| PREDICTED: SEC14-like 2 isoform 2 [Pan troglodytes]	210.0	[0..37]	[161..362]

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Predicted Domain #1

Region A:
Residues: [1-164]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEDKQFIRR DKGTKKTSTS LKEVDIYRDT FIRYMGYSNE IGESFRPLVP KSLVAASYGM  60
   61 AIGYVCTDTF DKALRLQMEG ASSREVAVKG GDVFCWQMLA SVAIPGLVIN RITWATKTLL 120
  121 SKAPMPVLKT VPTLVGLASI PLIIHPIDSM VDRLMDATYR KTVR

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits