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View Structure Prediction Details

Protein: FBpp0311215
Organism: Drosophila melanogaster
Length: 608 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0311215.

Description E-value Query
Range
Subject
Range
FBpp0293023 - type=protein; loc=X:join(17153508..17154364,17156673..17157011,17162552..17163022,17163964..17164147...
390.0 [0..6] [608..1324]

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Predicted Domain #1
Region A:
Residues: [1-85]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMLGSVKMH KNSRRNYFTL SFHRFDIFRS NKKAKLLNAG STNGSSIAAS SDDSQSRYGG  60
   61 SVHAANGSAA NGHFYGYSEG NKNQG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [86-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNGNGNGNGN GGGGNYHSHP NQPHYATGQP HQYTPSLYGG GSSAEDHYEL TQQQQQIYGE  60
   61 THLPSGQRTG GPNLVNKQLV LPFVPPSFPN KSQDGVTHLI KPSEYLKSIS IDKRSCPSSA 120
  121 RSTDTEDYMQ IQIAQQQSHP HQHQHHPHPH PH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.0
Match: 1m2vB
Description: Sec24
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [238-352]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PHHPHQLHGM GEQPPLPPPP PPLPHGMLPP QPPMGPPMGV AGGQDATMSG KSHKPKKPHG  60
   61 SAPNSQDTAT RKQHQPLSAI SIQDLNSVQL RRTDTQKVPK PYQMPARSLS MQCLT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [353-608]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSTETYLKSD LIAELKISKD IPGIKKMKVE QQMASRMDSE HYMEITKQFS GNNYVDQIYL  60
   61 QIPERDQAGN AIPDWKRQMM AKKAAERAKK DFEERMAQEA ESRRLSQIPQ WKRDLLARRE 120
  121 ETENKLKAAI YTPKVEENNR VADTWRLKNR AMSIDNININ LAGMEQHYQQ IQFQQKQQQL 180
  181 QLGNKENHVD PKGADQDQEH GVGIGSGVGN ANSGVIGGQE LIDPSEGSQG RAEEEEDNII 240
  241 PWRAQLRKTN SRLSLI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.045757
Match: 2i1jA
Description: No description for 2i1jA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle