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View Structure Prediction Details

Protein: CG9104-PA
Organism: Drosophila melanogaster
Length: 412 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9104-PA.

Description E-value Query
Range
Subject
Range
gi|125980627|ref... - GA21545-PA [Drosophila pseudoobscura], GA21545 [Drosophila pseudoobscura pseudoobscura]
gi|125980627, gi... - gi|54642644|gb|EAL31390.1| GA21545 [Drosophila pseudoobscura pseudoobscura], gi|125980627|ref|XP_001...
601.0 [0..1] [412..1]

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Predicted Domain #1
Region A:
Residues: [1-152]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSHTNETAA TSTTAGAVTN GAGGSGAGAA GAHGSTEGKI RCIFLSEFHA TAGCKISCQV  60
   61 PDNYISKDVF DAINVYIIPK QHLQRCILTV NAMDVKIVGY PVGIQDQQKY ARNAFLFNLC 120
  121 FVCDSRARSV QYEPVVKKLS EYLIMMEEES CF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [153-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSREDDKRRL QNIFETVLRD LNERKVATIV EGDNTIYLKI VMHKPDPPPV KDHMVPLLLA  60
   61 NLRDAPLDNW DLTTQQILPY INGINHVARI AAEADVETDL VKSCIQNLVY YGVVQLLPIL 120
  121 KYSNVYMTQN LKHLIQSASL SGACRKYVAL RPDKTLPSVQ RIFQFYASMT HGVTLRAICQ 180
  181 RLCPQHHNID ERRM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [347-412]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VIFGLQHRFI RCIHKYPVFT GSVPSGRQKM YTGLISFDEI CCKTGLSPCT IERDIEKDTN  60
   61 VTVIWK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle