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View Structure Prediction Details

Protein: TH1-PA, FBpp0309276
Organism: Drosophila melanogaster
Length: 578 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TH1-PA, FBpp0309276.

Description E-value Query
Range
Subject
Range
gi|114682835 - gi|114682835|ref|XP_001139660.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
1016.0 [0..1] [578..19]

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Predicted Domain #1
Region A:
Residues: [1-166]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVEYDDSGW QGRAKGQTNP EETLEDNPQK TIQECLEKFL TPDYIMEPGI FTQLKRYFQS  60
   61 GGSPEEVISM LSENYKAVAQ MANLLAEWLI LAGVKVTEVQ AMVENHLKEM ILKSFDPKKA 120
  121 DTIFTEEGET PDWLTEMIDH YTWRSLIYRL AEEYPDCLML NFTIKL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [167-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ISDAGFQSEI TSISTAAQQI EVFSRVLKTS IVKFLNNPDD VHGAIQECAR MVCHGQHTYV  60
   61 YSQVLIQVLS QEQKGGFNMK RLSQEIIKYA LQNNQNVTPI TMALNGSAVY PQACQALTSM 120
  121 LTRNTLNPAD ITVLFRNYSG SDP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [310-359]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPIDLIRNPQ FLELLVDALF RSGVKINPEH KPKYMFLLAY ASAVIDQPAK 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [360-578]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRPMTERMLN KEELKSTIQA IEKAHTICNV DQGSTELIAE LQTLYNCIKY PVVGVGVIRW  60
   61 IENVVMEPSY FKLSTDSCPT HLAVLDEVAA VHPTLQQQIL FLLIRLFESK QDELEILVQL 120
  121 EMKKMILDRM VNLLTRGCVV PVLRYIKQCC AIEDTDISLI RYFVTEVLET ITHPYSPEFV 180
  181 QLFLPMVENE EITGTMRGEG DNDPVSEFIV HCKAHYTTV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle