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View Structure Prediction Details

Protein: Gpi1-PA
Organism: Drosophila melanogaster
Length: 426 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gpi1-PA.

Description E-value Query
Range
Subject
Range
gi|10303238 - gi|10303238|emb|CAC10056.1| GPI1 protein [Drosophila melanogaster]
521.0 [0..1] [426..1]

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Predicted Domain #1
Region A:
Residues: [1-138]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIKIYLPVN YYYLNKSTNL YGQVQINEDN VVSYYVLEAS DLEFSDKAIN HEKGNLRFLG  60
   61 SILNEDFNAD QNQFLKFNMR LCFTYNSSQA NITLVYLGIT PEYLKHIKVI LYDKQMVRNL 120
  121 FVSGESENRR SLEYNDND

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [139-426]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STDCDFLELS RLNQPTADNQ NKANNNANKS IQYGLTLIAD SPIKIFEYMA ENVFINSIMY  60
   61 VIDELYGLLK VLEGSPIGLK LNIHLNNFFL DCFKYHIELW STFLDFIEPL VRQVFLAIGM 120
  121 IGCLGFTFQI ALLVDLISVI GLHSHCFYIY TKVLYNVERR GLSVLWQVVR GNRYNILKGR 180
  181 TESHNYMNRQ LYLATIFFSA ILFLLPTTLV YYIVFAALKA LTFATLSVFH FLRRKLMYLP 240
  241 IEVCIKRLLR GCHEIDCIQI KDVSHHERAF LMHKQQKINV TVYKITTL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 77.638272
Match: PF05024.6
Description: No description for PF05024.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle