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View Structure Prediction Details

Protein: eIF5-PF, eIF5-PE...
Organism: Drosophila melanogaster
Length: 464 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for eIF5-PF, eIF5-PE....

Description E-value Query
Range
Subject
Range
gi|73964075 - gi|73964075|ref|XP_854659.1| PREDICTED: similar to eukaryotic translation initiation factor 5 isofor...
435.0 [0..3] [445..2]

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Predicted Domain #1
Region A:
Residues: [1-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATVNVNRSV TDIFYRYKMP RLQAKVEGKG NGIKTVLVNM AEVARAIGRP ATYPTKYFGC  60
   61 ELGAQTLFDH KNERFVVNGS HDVNKLQDLL DGFIRKFVLC PECDNPETNL TVSAKNQTIS 120
  121 QSCKACGFHG LLKVNHKVNT FIVKNPPSLN PAA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.154902
Match: 2g2kA
Description: No description for 2g2kA was found.

Predicted Domain #2
Region A:
Residues: [154-383]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QGSSLTEGKR SRKQKQKNDN ADGSMTNNSL ANNSGGESDG GNGTNQASQT EAEISAAIPE  60
   61 KTAKDDDDEG WSVDVSKEAI RARLQDLTDG AKGMTISDDY DKTEKERIDI FYELVKDKRD 120
  121 KKQLDDVQTH KELVIEAERL DIINKAPLVL AELLFTENII KDVQKNRPLL LRFTLNNPKA 180
  181 QRYLIGGVEQ TVELHKGILM SKVAGIFKLF YDLDILDEAV ILEWAQKVSK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.522879
Match: 1ug3A
Description: C-terminal portion of human eIF4GI
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [384-464]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RHVSKNIAAE IHEKAMPFVL WLKNAEEESS ESEEEEDDES EEDNYVSSAG QRGGQRVVQR  60
   61 GIPRAVAGDE DDEDDVNIDD I

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.69897
Match: 2iu1A
Description: No description for 2iu1A was found.

YRC Informatics Platform - Version 3.0
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