| Protein: | sd-PE, sd-PF, FB... |
| Organism: | Drosophila melanogaster |
| Length: | 440 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sd-PE, sd-PF, FB....
| Description | E-value | Query Range |
Subject Range |
|
|
814.0 | [0..1] | [440..1] |
|
Region A: Residues: [1-82] |
1 11 21 31 41 51
| | | | | |
1 MKNITSSSTC STGLLQLQNN LSCSELEVAE KTEQQAVGPG TIPSPWTPVN AGPPGALGSA 60
61 DTNGSMVDSK NLDVGDMSDD EK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [83-169] |
1 11 21 31 41 51
| | | | | |
1 DLSSADAEGV WSPDIEQSFQ EALSIYPPCG RRKIILSDEG KMYGRNELIA RYIKLRTGKT 60
61 RTRKQVSSHI QVLARRKLRE IQAKIKV
|
| Detection Method: | |
| Confidence: | 40.221849 |
| Match: | 2hzdA |
| Description: | No description for 2hzdA was found. |
|
Region A: Residues: [170-292] |
1 11 21 31 41 51
| | | | | |
1 QFWQPGLQPS TSQDFYDYSI KPFPQPPYPA GKTSTAVSGD ETGIPPSQLP WEGRAIATHK 60
61 FRLLEFTAFM EIQRDEIYHR HLFVQLGGKP SFSDPLLETV DIRQIFDKFP EKSGGLKDLY 120
121 EKG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [293-440] |
1 11 21 31 41 51
| | | | | |
1 PQNAFYLVKC WADLNTDLTT GSETGDFYGV TSQYESNENV VLVCSTIVCS FGKQVVEKVE 60
61 SEYSRLENNR YVYRIQRSPM CEYMINFIQK LKNLPERYMM NSVLENFTIL QVMRARETQE 120
121 TLLCIAYVFE VAAQNSGTTH HIYRLIKE
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.352 | 0.002 | zinc ion binding | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.235 | 0.001 | zinc ion binding | d.124.1 | Ribonuclease Rh-like |
| View | Download | 0.370 | 0.000 | zinc ion binding | d.188.1 | Prokaryotic ribosomal protein L17 |
| View | Download | 0.259 | 0.000 | zinc ion binding | d.195.1 | YopH tyrosine phosphatase N-terminal domain |
| View | Download | 0.254 | 0.000 | zinc ion binding | a.95.1 | Influenza virus matrix protein M1 |
