| Protein: | HDAC6-PC |
| Organism: | Drosophila melanogaster |
| Length: | 1138 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HDAC6-PC.
| Description | E-value | Query Range |
Subject Range |
|
|
973.0 | [0..11] | [1138..8] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MLTKDLNSFS QSPPIVTRRS AQQAKIQTRA MASKSKTGTT GAATAAGGTG SSSGSISGGF 60
61 NAADPRKSNK PNAALLEAKR RARNNMLKNQ GCGSQE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [97-499] |
1 11 21 31 41 51
| | | | | |
1 SVTDIFQNAV NSKSLVRKPT ALIYDESMSQ HCCLWDKEHY ECPERFTRVL ERCRELNLTE 60
61 RCLELPSRSA TKDEILRLHT EEHFERLKET SGIRDDERME ELSSRYDSIY IHPSTFELSL 120
121 LASGSTIELV DHLVAGKAQN GMAIIRPPGH HAMKAEYNGY CFFNNVALAT QHALDVHKLQ 180
181 RILIIDYDVH HGQGTQRFFY NDPRVVYFSI HRFEHGSFWP HLHESDYHAI GSGAGTGYNF 240
241 NVPLNATGMT NGDYLAIFQQ LLLPVALEFQ PELIIVSAGY DAALGCPEGE MEVTPACYPH 300
301 LLNPLLRLAD ARVAVVLEGG YCLDSLAEGA ALTLRSLLGD PCPPLVETVP LPRAELAQAL 360
361 LSCIAVHRPH WRCLQLQQTY DCVELQDRDK EEDLHTVLRH WIG
|
| Detection Method: | |
| Confidence: | 107.0 |
| Match: | 2nvrA |
| Description: | No description for 2nvrA was found. |
|
Region A: Residues: [500-954] |
1 11 21 31 41 51
| | | | | |
1 GPPPMDRYPT RDTAIPLPPE KLTSNAARLQ VLRAETKLSV PSFKVCYAYD AQMLLHCNLN 60
61 DTGHPEQPSR IQHIHKMHDD YGLLKQMKQL SPRAATTDEV CLAHTRAHVN TVRRLLGREP 120
121 KELHDAAGIY NSVYLHPRTF DCATLAAGLV LQAVDSVLRG ESRSGICNVR PPGHHAEQDH 180
181 PHGFCIFNNV AIAAQYAIRD FGLERVLIVD WDVHHGNGTQ HIFESNPKVL YISLHRYEHG 240
241 SFFPKGPDGN FDVVGKGAGR GFNVNIPWNK KGMGDLEYAL AFQQLIMPIA YEFNPQLVLV 300
301 SAGFDAAIGD PLGGCKVTAE GYGMLTHWLS ALASGRIIVC LEGGYNVNSI SYAMTMCTKT 360
361 LLGDPVPTPQ LGATALQKPP TVAFQSCVES LQQCLQVQRN HWRSLEFVGR RLPRDPVVGE 420
421 NNNEDFLTAS LRHLNISNDD ATAAAGGLAG DRPDC
|
| Detection Method: | |
| Confidence: | 8.56 |
| Match: | 2nvrA |
| Description: | No description for 2nvrA was found. |
|
Region A: Residues: [955-1138] |
1 11 21 31 41 51
| | | | | |
1 GDERPSGSKP KVKVKTLSDY LAENKEALEQ SEMFAVYPLK TCPHLRLLRP EEAPRSLDSG 60
61 AECSVCGSTG ENWVCLSCRH VACGRYVNAH MEQHSVEEQH PLAMSTADLS VWCYACSAYV 120
121 DHPRLYAYLN PLHEDKFQEP MAWTHGCAWR EDGCYATGPD GRDEDDDDDN GAGSSICLRL 180
181 ERNN
|
| Detection Method: | |
| Confidence: | 22.69897 |
| Match: | 2g43A |
| Description: | No description for 2g43A was found. |
