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View Structure Prediction Details

Protein: CG42271-PB
Organism: Drosophila melanogaster
Length: 199 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG42271-PB.

Description E-value Query
Range
Subject
Range
gi|125846712, gi... - gi|68359010|ref|XP_693644.1| PREDICTED: si:ch211-193c2.2 [Danio rerio], gi|125846712|ref|XP_00133230...
119.0 [0..1] [185..1]

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Predicted Domain #1
Region A:
Residues: [1-199]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFNKPELNS LASNPATRFD KEGLLIITDR QEGFLWRSSE VRVERWCKLR GNLLFYLKDK  60
   61 DPKSAVAGLL VLENCRARIQ NEERDSEGYV FDLDFKDSPS ERFITRSSAE RLAWVQCIEH 120
  121 ASSEKLNALI RQLKEQIVSQ SRQPSSGASS SMGNHIDLGM PLEQQMQEQL QLHGQPAEEL 180
  181 SVPVPTEVVA PFEGDLIQF

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Detection Method: PSI-BLAST
Confidence: 17.30103
Match: 1u5fA
Description: Crystal Structure of the PH Domain of SKAP-Hom with 8 Vector-derived N-terminal Residues
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle