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View Structure Prediction Details

Protein: CG1662-PA, FBpp0...
Organism: Drosophila melanogaster
Length: 245 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG1662-PA, FBpp0....

Description E-value Query
Range
Subject
Range
gi|39939896, gi|... - gi|39939896|ref|XP_359485.1| hypothetical protein MG05292.4 [Magnaporthe grisea 70-15], gb|EAA52600....
215.0 [0..11] [243..57]
gi|125983524, gi... - gi|54643843|gb|EAL32586.1| GA14082 [Drosophila pseudoobscura pseudoobscura], gi|125983524|ref|XP_001...
gi|54643843|gb|E... - GA14082-PA [Drosophila pseudoobscura], GA14082 [Drosophila pseudoobscura pseudoobscura]
214.0 [0..1] [245..1]
gi|76621079 - gi|76621079|ref|XP_876207.1| PREDICTED: similar to CG32262-PA [Bos taurus]
213.0 [0..36] [235..2]
gi|12324641, gi|... - gi|30695366|ref|NP_564615.3| peroxisomal membrane protein-related [Arabidopsis thaliana], pir||H9656...
206.0 [0..54] [243..157]
gi|115453925, gi... - gi|50901268|ref|XP_463067.1| putative peroxisomal membrane protein [Oryza sativa (japonica cultivar-...
203.0 [0..54] [243..154]
gi|73985977 - gi|73985977|ref|XP_541943.2| PREDICTED: similar to CG32262-PA isoform 1 [Canis familiaris]
202.0 [0..52] [237..2]
gi|62202450 - gi|62202450|gb|AAH93008.1| Hypothetical protein MGC12972 [Homo sapiens]
200.0 [0..52] [235..2]

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Predicted Domain #1
Region A:
Residues: [1-174]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSLRGCPAR GLILSRAIRG QRSLRMSWPR NSSATGGAGG AAPGGGSSTT TSTIGFGALQ  60
   61 KLREWHASAF SSRFLLFTNV GISLTLSCVG DVLEQHLEIY CGEIERFEST RTAHMAISGV 120
  121 TVGVICHYWY KMLDKRMPGR TMRVVAKKIV LDQLICSPIY ISAFFVTLGL LEQK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [175-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKHEVWEEIK EKAWKLYAAE WTVWPVAQFV NFYWIPTHYR IFYDNIISLG YDVLTSKVKH  60
   61 KQSHSHLKKI P

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 11.79588
Match: PF04117.3
Description: No description for PF04117.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle