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View Structure Prediction Details

Protein: CG42237-PA
Organism: Drosophila melanogaster
Length: 363 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG42237-PA.

Description E-value Query
Range
Subject
Range
gi|116126198, gi... - gi|118788629|ref|XP_316877.3| ENSANGP00000017734 [Anopheles gambiae str. PEST], gi|116126198|gb|EAA1...
417.0 [0..63] [363..1]

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Predicted Domain #1
Region A:
Residues: [1-240]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLIQNRWQE IGLQLIFVFN FGWIRRRCFW VAAQSSRRCL SGSSSRSKKP RHTKMPYNLW  60
   61 LRRRLQLLAS LLFCCLLGYL TSEAVAKPTL SFSLPQGLQG FPSFQSFTQQ IIEQRSARQM 120
  121 KTYSGKRVSN DSLIMIYYHD LTIAVTELGP QKLLLGCELI EIYNDKEGKM LLEGLSHYNR 180
  181 PLEIKFDEML KLMDQCEHVD KLSYASRHKS KLEGGERSNG GSASATTGGA NDGVALKLAT 240
  241 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [241-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NIFPRSPFSL LSGIIPGTKW CGTGDIAETY SDLGSEMAMD RCCRQHDLCP IKIRAYQNKY  60
   61 ELMNDSLYTK SHCICDDMLF SCLKMTNTSA SQLMGSIYFN LVQVPCLDGR SNHYKFRAAK 120
  121 EGF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.221849
Match: 1pocA
Description: CRYSTAL STRUCTURE OF BEE-VENOM PHOSPHOLIPASE A2 IN A COMPLEX WITH A TRANSITION-STATE ANALOGUE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.44512274794048 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle