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View Structure Prediction Details

Protein: lic-PA
Organism: Drosophila melanogaster
Length: 334 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lic-PA.

Description E-value Query
Range
Subject
Range
gi|5101687 - gi|5101687|emb|CAB45101.1| MAPKK [Drosophila melanogaster]
276.0 [0..1] [329..1]

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Predicted Domain #1
Region A:
Residues: [1-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKRHRLTPF TIAKEPEAAI VPPRNLDSRA TIQIGDRTFD IDADSLEKIC DLGRGAYGIV  60
   61 DKMRHKQTDT VLAVKRIPMT VNIREQHRLV MDLDISMRSS DCPYTVHFYG AMYREGDVWI 120
  121 CMEVMSTSLD KFYPKVFLHD LRMEESVLGK IAMSVVSALH YLHAQLKVIH RDVKPSNILI 180
  181 NRAGQVKICD FGISGYLVDS IAKTIDAGCK PYMAPERIDP QGNPAQYDIR SDVWSLGIGM 240
  241 IEMATGRYPY DNWRTPFEQL RQVVEDSPPR LPEGTFSPEF EDFIAVCLQK EYMARPNYEQ 300
  301 LLKHSFIVEH LQRNTDISEF VARILDLPDA QPAQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.221849
Match: 2dylA
Description: No description for 2dylA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle