YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: fw-PA, FBpp0309601
Organism: Drosophila melanogaster
Length: 1174 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fw-PA, FBpp0309601.

Description E-value Query
Range
Subject
Range
gi|54643387, gi|... - gi|54643387|gb|EAL32131.1| GA13417-PA [Drosophila pseudoobscura], gi|125982341|ref|XP_001355075.1| G...
513.0 [0..35] [1174..155]

Back

Predicted Domain #1
Region A:
Residues: [1-1174]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFCCNIPVDA SVATSTSTSI STYPLQRATK RAMTPPNAMA LIMLLLLALC AAGNGQICGP  60
   61 PAVPLNAKVR TITVDSQIAE AHYECDAGYE LFGPSAVKCD RRTGWDRDLP FCGVNVAYRK 120
  121 PVNQSSYTRS GPASYANDGK PGNKNPDGQE CSETQKEPSP WWRVDLLTPQ AVHVVRITTR 180
  181 GCCGHQPLQD LEIRVGNSSA DLQRNPLCAW YPGTLDEGVV KTFTCARPLV GQYVAIQLVG 240
  241 VEGSLSLCEV ETFTNDEFSV DRCLSPKIGV DTVVTTFSKT CYDFHITKGE SFDKAQAICK 300
  301 QTGGDLVHDF RGATSSYILS ELERRKSELK PQLVWIGAQK EPGITSRTWK WVNGDVVQKP 360
  361 TWGKDQPNNY NGEQNCVVLD GGRNWLWNDV GCNLDYLHFI CQHSPLSCGS PDAQQNTTVM 420
  421 GKKFTLGEKI QYTCPKGHSL LGQTERECRL DGTWSGSSPT CKYVDCGSLP ELKFGSIHMS 480
  481 EERTSFGVVA TYSCHENYTL IGNENRTCAM DGWSGKQPEC LVDWCPDPQP IAGGDVRFND 540
  541 KRAGSTATYV CEPGYVLVGE AIISCGLGGE WSSKTPSCRF VDCGAPARPN RGIAILLNGT 600
  601 TTVNSVVKYE CDEDHWLDGQ SELYCTREGK WSGEAPVCEL VTCETPSVPS GSFVIGYDYN 660
  661 VHSKIQYNCD PGHIMHGTPV LECLDSGEWS ADAPYCEYID CGTILPIPYG SHKYVTNTTY 720
  721 VGSEVVFSCS QSHKLSGVLK RTCLESAVWS DASPKCEEIR CPEPKLAAHS LLSVTGNDRM 780
  781 YGRTLIRTSE SSQNTAQTYK IGALAKYRCE RGYKMVGEAL ATCTDSGQWS GTIPECVYVE 840
  841 CGAPEGINNG KVVLATNATY YGAAVLYECN VNFKLNGVSR RLCTEHGNWS HEAPECVEVV 900
  901 CDTPNINENL IVEAGPRAVG SVATFKCAKG RIMMGNDTRV CQKNGKWTGK SPTCRPVDCG 960
  961 RPLAIENGRV IVVNDSTLYG GSAEYHCIPN YNRIGQYLRK CTEDGAWSGK QPRCELATAE1020
 1021 GQETSELGTG VGIGATVIVA LLVIFGLIFL YRNKARPVKN TENVQAAETK DERNAAVMSY1080
 1081 STLEANNRMH MDNNPSATFN TFHGGAGGRS NGGGNPDANS NGERLNNNRS ENIYDQIPNE1140
 1141 QFYDAPYEMR TNDEVYEPEP VASNVITING ISVR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.522879
Match: 2q7zA
Description: No description for 2q7zA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle