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View Structure Prediction Details

Protein: tsg-PA
Organism: Drosophila melanogaster
Length: 249 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tsg-PA.

Description E-value Query
Range
Subject
Range
TWSG1 - twisted gastrulation homolog 1 (Drosophila)
296.0 [0..4] [206..3]
gi|109121565 - gi|109121565|ref|XP_001099214.1| PREDICTED: similar to twisted gastrulation [Macaca mulatta]
gi|90079225 - gi|90079225|dbj|BAE89292.1| unnamed protein product [Macaca fascicularis]
gi|114672282 - gi|114672282|ref|XP_001138675.1| PREDICTED: twisted gastrulation [Pan troglodytes]
296.0 [0..4] [206..3]
TWSG1_MOUSE - Twisted gastrulation protein homolog 1 OS=Mus musculus GN=Twsg1 PE=1 SV=1
294.0 [0..5] [206..4]
TWSG1_PONAB - Twisted gastrulation protein homolog 1 OS=Pongo abelii GN=TWSG1 PE=2 SV=1
TWSG1_PONPY - Twisted gastrulation protein homolog 1 precursor - Pongo pygmaeus (Orangutan)
293.0 [0..4] [206..3]
gi|149037370, gi... - gi|34877944|ref|XP_343638.1| PREDICTED: similar to twisted gastrulation homolog 1 [Rattus norvegicus...
291.0 [0..5] [206..4]
gi|73962202 - gi|73962202|ref|XP_547668.2| PREDICTED: similar to twisted gastrulation [Canis familiaris]
289.0 [0..5] [206..4]
gi|115497310, gi... - gi|76651994|ref|XP_617448.2| PREDICTED: similar to twisted gastrulation [Bos taurus], gi|115497310|r...
287.0 [0..7] [206..6]

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Predicted Domain #1
Region A:
Residues: [1-72]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLLCYFVIL FVGIAPWSSL ANDDGCNEVV CGSVVSKCLI TQSCQCKLND CHCCKDCLNC  60
   61 LGELYIECCG CL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [73-249]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DMCPKHKDVL PSLTPRSEIG DIEGVPELFD TLTAEDDEGW STIRFSMRAG FKQRVQGGAS  60
   61 GDAGNGNGNG NAGSAGVTLC TVIYVNSCIR ANKCRQQCES MGASSYRWFH DGCCECVGEN 120
  121 CLNYGINESR CRGCPEDQDQ LLTADTVPAE AEQDLERFFG NEEIEDEWGY GEEDEFS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 89.318759
Match: PF04668.3
Description: No description for PF04668.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle