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View Structure Prediction Details

Protein: m-PA
Organism: Drosophila melanogaster
Length: 682 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for m-PA.

Description E-value Query
Range
Subject
Range
gi|108882080, gi... - gi|157129733|ref|XP_001655479.1| hypothetical protein AaeL_AAEL002513 [Aedes aegypti], gi|108882080|...
478.0 [0..24] [682..14]

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Predicted Domain #1
Region A:
Residues: [1-111]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWSPQKGPTR LWDLRFSSCI FILHLMFSLV IAGNELWPME RPDGMPNIVS LEVMCGKDHM  60
   61 DVHLTFSHPF EGIVSSKGQH SDPRCVYVPP STGKTFFSFR ISYSRCGTKP D

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [112-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LNGQFYENTV VVQYDKDLLE VWDEAKRLRC EWFNDYEKTA SKPPMVIADL DVIQLDFRGD  60
   61 NVDCWMEIQH GKGPWAPPVS GIVPLGSTLT LVVAINDYRG EFDMRVKSCV ASDGSGHVIN 120
  121 LSDEFGCVLR PKMISRFLKA RAPDERATVI TYAFFHAFKF PDALSVHIKC KVEICRHGCL 180
  181 DHCQNTGVGG GGGGSGESLG LGLGLG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [318-382]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LTNANERKDV HMSDALGSSS NDLLRDLALP PGGQHGMGMG MGPDHDIFYE DIIHDHKQTL  60
   61 GGGGM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [383-569]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PAGGDYGHEK SVNLQPRPVH EEQEEADLSD LFGDEDLADL DMEGGEGERY LGLKKSGKFP  60
   61 HGPRQLEAQK RMGVPMAGPR SLEPHGHGDE DVPRPVYRPQ AEALKQPRED HIDLDKEEEE 120
  121 EKEKEEKTQQ EDKLTGEGGA AASNDSSKSR RRRSLVISDR KVRSADVGVS GLYDVISEAD 180
  181 LAFSPDS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [570-682]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KQEAVTVFQG KISEEVVYGI CMPVPGFSIL FIVVISTTIV SALVAGSLLY RYQLQKEALE  60
   61 KQTPMPVTGT LASWMTLRLF RLRHMQQQQQ QQQQQQQQQQ QVRQPSSGHE TVQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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