YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG2111-PA
Organism: Drosophila melanogaster
Length: 931 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG2111-PA.

Description E-value Query
Range
Subject
Range
gi|66512450 - gi|66512450|ref|XP_396261.2| PREDICTED: similar to CG14516-PA, isoform A isoform 1 [Apis mellifera]
750.0 [0..23] [921..87]

Back

Predicted Domain #1
Region A:
Residues: [1-931]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLSYLTILT ALFFHLEANK TAVGRLPKWL VPLSYRVDIV TRINQPYQPF GGTVVIDLRS  60
   61 ERSTKRIVLN AHDLAIGKRR AVTLSDKNGN SVPVSSIQMD IKLSRLTVSL KRPLKVNVTY 120
  121 SMRVAFTSVL RNDNTGFYSS NYVDHNTTLT QWLAATQFEP NHAREAFPCF DDPIFRTPFK 180
  181 INLAHPYLYR ALSNMPVQRT IRHASLKDYV WTQFVESHPM QTYLVAFMIS KFDRPGFTSS 240
  241 ERSDCPISTW ARPDALSQTE FANMVVAPLL SFYEDLFNST YRQKKIDLVA LPDFTFKSKE 300
  301 NWGLPAFAEE SLLYDSQRSS IDDQQGVARA VAMMVVNQWF GNLVSVAWWH EIWLKNVFAL 360
  361 YLSRFGVHSL RPEWDYQERH ALQLYLSVLD YDAHVNTDLV TASVPDESHI WAAYNEIGER 420
  421 KAAVLFEMLH RVMGEEAWLT ALRRYLVVYA NRTATSSDFW DLLQLQVDRN GRLGKGLNIT 480
  481 RIMKCWLGQP GYPLVTVTRN YDHRTAIVSQ QRFFITPQFR NRWARNPCWW VPLSYTCPSC 540
  541 QHSEIISFSR WLTCPTSKPS SKSNTVLLEK LEAEPTDWIL FNVQHTAPFR VNYDLRNWQL 600
  601 LNKTLADPNK FRLIHRVNRA QLVDDLFSLA WSGDIEYDMA LGILGYLEHE DEFVVWVATE 660
  661 ISFERINNVA KSNPNYLIFK TYMRLLLERQ FKRVISSDLT SSSGNMTHRP VIIRLACEYE 720
  721 LPACVSLARR EFMKGTPEKG GWMTIRERET VVCTAVKFGT EGDRDMVESM YKRSNFAAEK 780
  781 ESLLTALACS RNVFALQRVL IWTFESSGVR KQNARRTFKA VVSNSMGYRL AKKYVSVNMQ 840
  841 NIRNYCSNST DKVVNLMTPL IECLSTPKEL LYFSKFFKEI LRDMNGSERL IKILLERGND 900
  901 NIHWQRTKFR PMLQAIRDII LWRSRAKRIL K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 121.0
Match: 1z1wA
Description: Crystal structures of the tricorn interacting facor F3 from Thermoplasma acidophilum, a zinc aminopeptidase in three different conformations
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle