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View Structure Prediction Details

Protein: CG2990-PB
Organism: Drosophila melanogaster
Length: 1100 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG2990-PB.

Description E-value Query
Range
Subject
Range
gi|24640930, gi|... - gi|7291108|gb|AAF46543.1| CG2990-PA, isoform A [Drosophila melanogaster], gi|24640930|ref|NP_572597....
755.0 [0..1] [1100..1]

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Predicted Domain #1
Region A:
Residues: [1-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATKRVLTPN ILENDNTDVT SSNPQKKFKE QLDFSSDEVE NIDWGDNDDF DLALIAAMDS  60
   61 ISNHRLELTK WQRCEVVRLE QLPNRKGLKV HVKRISGGDP ETADCQLLPP WNCMPMQVGD 120
  121 TVSLLGKWDP SAGCYVVDKE QGYCVSHPDF LISGTTVTGS LFCKRKSVLQ ERFRGLDSGN 180
  181 SVMVIGTLVH ELLQKVLRQK LFDKKHIQSA LQEMLASSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [220-428]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LAHLLYASNL IQVEMEDHLM KFIDPIVSFV AQYVKGEPPS VLLPEVYRGQ IHEICDIEEN  60
   61 LWVPQLGLKG KVDVSVKVKN QRQREEIIPL ELKTGRASFS MEHKGQLLLY QLMHSAQGRD 120
  121 TQSGLLLYLK EGLLREVASG RNEQRDLLML RNDLAYWLTR EVAIPASKED PLEQLPLPEP 180
  181 VYHHSACGNC AYNTICSSFA QKDSSLQLS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [429-1100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSHPLKKLMP QLLEHLSEAD HAYVQHWCGL LALEEQHNRQ SSHVRSFWTK DPAEREKEGI  60
   61 AIRHLKLVKG QEVILEEGRY RQTLELGEEA DPSRDLSLSG FDLGEYVVIS STSRLAVAAG 120
  121 FIVSIEARRL DLRLERDLSQ RYSEETFIID KHDSQSFATF NFTNLGMLLS EGERFQELRD 180
  181 IIVAKKPPEQ HKVLPKIILT KGAPILLNLN KVQQNAALRA LTTSSHLLIK GLPGTGKTQT 240
  241 LVALVRLLHL LGKSVLITAQ THSAVDNLIM RLLPFGLPMM RLGSGSRIHK QLEEISEERL 300
  301 TKDCKTVEEL EKALGQPSIV GVTCLGCGHP LFQRRQFDYC IVDEATQVLQ PTVLRPLIHC 360
  361 SKFVLVGDPE QLPPIVRSKE ARQRGADETL FQRLDSEKAT AVLSLQYRMN KTITRLANEL 420
  421 TYGGDLKCAS DEVSGARFEV ELLNEAPRWV QRALTTHLEQ AVTLINTGDC LERCQEFVYA 480
  481 SQRLVDTCSS IEQSFSEDKD EIRKLTSKKR VSKYTNYCEA GIVMHLLRYL LKSGYEASRI 540
  541 GVIAPYRAQV ELFKKLASKL DTDLECNTVD QFQGRDKNLI IYSCSKTGGD FSDMERSREA 600
  601 EILEDQRRLT VAITRAKNKL ILLGDIKCLE QYGPFRQLFK HIPDRCRLKL EEGRMEFGWQ 660
  661 RIQEDLVGLM DT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 90.69897
Match: 2gjkA
Description: No description for 2gjkA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle