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View Structure Prediction Details

Protein: FBpp0309288, t-PA
Organism: Drosophila melanogaster
Length: 387 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309288, t-PA.

Description E-value Query
Range
Subject
Range
gi|54642899|gb|E... - GA11415-PA [Drosophila pseudoobscura], GA11415 [Drosophila pseudoobscura pseudoobscura]
gi|125981165, gi... - gi|54642899|gb|EAL31643.1| GA11415 [Drosophila pseudoobscura pseudoobscura], gi|125981165|ref|XP_001...
296.0 [0..1] [376..1]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSGKILPRR QAVPVLYTRG THYEVGFDMG RTFGSMIKNF LILSKPLNET YLPLYQSPKG  60
   61 RQIYNETLGS VKDSFPQYVR ELEGVADGAE VEFHKLFLLH LDEILPQALK HQPRSKNQPT 120
  121 G

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [122-387]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CSTIIVNQKN CRLLGHTEDA LTETLNHYYF VVAHIISDKP QGKYNVKEEH FMSLCYAGHL  60
   61 PGYTMSHNHH GLVFSINTIS AELLRSGKTP RHFITRALLA TSNVDDAFRV LKDAGVGAAD 120
  121 ACSINFTFLA DPRQMCYNVE MAPSPDRKNE SHLNIKEVPL GEHNYHVNQF DRIRQDQAND 180
  181 LMISSSISRM QTFGAYNPPM SEQDVRHMLG DVSGGVYCVW RENNSCDEVV KTIAVGIFDL 240
  241 SARTISLYSD NPSETEPHCR LPLLYK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.522879
Match: 2bjfA
Description: Crystal Structure of Conjugated Bile Acid Hydrolase from Clostridium perfringens in Complex with Reaction Products Taurine and Deoxycholate
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle