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View Structure Prediction Details

Protein: CG11190-PA
Organism: Drosophila melanogaster
Length: 633 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG11190-PA.

Description E-value Query
Range
Subject
Range
gi|109091798 - gi|109091798|ref|XP_001108481.1| PREDICTED: similar to phosphatidylinositol glycan, class T precurso...
796.0 [0..16] [584..21]

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Predicted Domain #1
Region A:
Residues: [1-224]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYPVAFVLLL LVAPNADANL GRDDERFHEE LVVRPLSGDH VNTYFQFTTR WHYGEKDNLY  60
   61 HTQLTPRVIA ELLQQFAVKE LHIGLTQGLW RYETWGYPIV EATSGAEMWA WFSGANLTNR 120
  121 DVDRQWKELA NVFSGVLCAS LNFVDNTNSI APRHLIRPQF MPANGQRFVR YATLPREIVC 180
  181 TENLTPWKKL LPCGSASGFA SLLNSGHVHN TKYHSLGLKV RVLC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [225-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDHDEDNCIV ELTQTANLVY DLRLFELSNN DFSLRRLFGM GLNGYCELAE SSKIYVQRNE  60
   61 LGERYQLVPE PVHEVKTTRG GHSVVYSVYD MHEQFKEAGE RLFNVAWLAP 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [335-527]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSANRRRNLA KPSLPPVTVH RYLLGHGQER GRIVTEVTNS HYDALPIMLQ EVIPWYVHAY  60
   61 LHTLSIRRKP QRVNEYGGQR LTFKLLHYTP GKQRELPSHL EIGFMLPGQT SALISIDVDY 120
  121 LLLKWLEYPP DANHGHYIGS AIVSSQLPMG RNYTALPPEG HLFEHSFNAT RPSYVLSLHT 180
  181 EALIVSLPTP DFS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [528-633]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPYNVICLAC TVVALAFGPI HSVATKMIIV GRQTSAPKNF VKKIFNQLFR RGKATDETAA  60
   61 EGEGLPAAGA AATGVASGRA AISPGSPSGD QPLLEDLDEE EEEEQD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle