YRC Public Data Repository - Protein Structure Prediction

Protein:	CG15343-PA
Organism:	Drosophila melanogaster
Length:	213 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG15343-PA.

Description	E-value	Query Range	Subject Range
gi\|254251577, gi... - gi\|84362783\|ref\|ZP_00987397.1\| COG0259: Pyridoxamine-phosphate oxidase [Burkholderia dolosa AUO158],...	273.0	[0..2]	[212..12]
gi\|106770932, gi... - gi\|148654599\|ref\|YP_001274804.1\| pyridoxamine 5'-phosphate oxidase [Roseiflexus sp. RS-1], gi\|148566...	273.0	[0..2]	[212..11]
gi\|84355579 - gi\|84355579\|ref\|ZP_00980459.1\| COG0259: Pyridoxamine-phosphate oxidase [Burkholderia cenocepacia PC1... PDXH_BURCH - Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Burkholderia cenocepacia (strain HI2424) GN=pdxH PE=... PDXH_BURCA - Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Burkholderia cenocepacia (strain AU 1054) GN=pdxH PE...	271.0	[0..2]	[212..12]
PDXH_BURS3 - Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Burkholderia sp. (strain 383) GN=pdxH PE=3 SV=1 PDXH_BURL3 - Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Burkholderia lata (strain ATCC 17760 / LMG 22485 / N...	271.0	[0..2]	[212..12]
PDXH_BURCM - Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) ...	270.0	[0..2]	[212..12]
PDXH_BURMA - Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Burkholderia mallei GN=pdxH PE=3 SV=1 gi\|254203857, gi... - gi\|83620617\|ref\|ZP_00931034.1\| COG0259: Pyridoxamine-phosphate oxidase [Burkholderia mallei FMH], gi... gi\|254208838, gi... - gi\|83623857\|ref\|ZP_00934117.1\| COG0259: Pyridoxamine-phosphate oxidase [Burkholderia mallei JHU], gi... gi\|100916298, gi... - gi\|67636881\|ref\|ZP_00435824.1\| COG0259: Pyridoxamine-phosphate oxidase [Burkholderia mallei 10399], ... gi\|67642850, gi\|... - gi\|67642850\|ref\|ZP_00441601.1\| pyridoxamine 5'-phosphate oxidase [Burkholderia mallei GB8 horse 4], ... PDXH_BURMS - Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Burkholderia mallei (strain SAVP1) GN=pdxH PE=3 SV=1 gi\|85066724 - gi\|85066724\|ref\|ZP_01027577.1\| COG0259: Pyridoxamine-phosphate oxidase [Burkholderia mallei 10229] gi\|254360106, gi... - gi\|87318033\|ref\|ZP_01099038.1\| COG0259: Pyridoxamine-phosphate oxidase [Burkholderia mallei 20027212... PDXH_BURM7 - Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Burkholderia mallei (strain NCTC 10247) GN=pdxH PE=3... PDXH_BURMA - Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Burkholderia mallei (strain ATCC 23344) GN=pdxH PE=3... PDXH_BURM9 - Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Burkholderia mallei (strain NCTC 10229) GN=pdxH PE=3... gi\|167844578 - gi\|167844578\|ref\|ZP_02470086.1\| pyridoxamine 5'-phosphate oxidase [Burkholderia pseudomallei B7210] gi\|160697713, gi... - gi\|254176672\|ref\|ZP_04883329.1\| pyridoxamine 5'-phosphate oxidase [Burkholderia mallei ATCC 10399], ... gi\|243065521, gi... - gi\|243065521\|gb\|EES47707.1\| pyridoxamine 5'-phosphate oxidase [Burkholderia mallei PRL-20], gi\|16699...	269.0	[0..2]	[212..12]
gi\|52208907, gi\|... - gi\|53718493\|ref\|YP_107479.1\| pyridoxamine 5'-phosphate oxidase [Burkholderia pseudomallei K96243], g... PDXH_BURPS - (Q63WN7) Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP oxidase) (PNPOx) gi\|76578823, gi\|... - gi\|76809370\|ref\|YP_332473.1\| pyridoxamine 5'-phosphate oxidase [Burkholderia pseudomallei 1710b], gi...	269.0	[0..2]	[212..18]
gi\|217397068, gi... - gi\|217419764\|ref\|ZP_03451270.1\| pyridoxamine 5'-phosphate oxidase [Burkholderia pseudomallei 576], g... gi\|167909809 - gi\|167909809\|ref\|ZP_02496900.1\| pyridoxamine 5'-phosphate oxidase [Burkholderia pseudomallei 112] gi\|167917834 - gi\|167917834\|ref\|ZP_02504925.1\| pyridoxamine 5'-phosphate oxidase [Burkholderia pseudomallei BCC215] gi\|100124290, gi... - gi\|67761626\|ref\|ZP_00500334.1\| COG0259: Pyridoxamine-phosphate oxidase [Burkholderia pseudomallei S1... gi\|167718373 - gi\|167718373\|ref\|ZP_02401609.1\| pyridoxamine 5'-phosphate oxidase [Burkholderia pseudomallei DM98] gi\|167737423 - gi\|167737423\|ref\|ZP_02410197.1\| pyridoxamine 5'-phosphate oxidase [Burkholderia pseudomallei 14] PDXH_BURP6 - Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Burkholderia pseudomallei (strain 668) GN=pdxH PE=3 ... gi\|254261720, gi... - gi\|254261720\|ref\|ZP_04952774.1\| pyridoxamine 5'-phosphate oxidase [Burkholderia pseudomallei 1710a],... gi\|100061321, gi... - gi\|67754673\|ref\|ZP_00493578.1\| COG0259: Pyridoxamine-phosphate oxidase [Burkholderia pseudomallei Pa... PDXH_BURPS - Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Burkholderia pseudomallei (strain K96243) GN=pdxH PE... gi\|167893108 - gi\|167893108\|ref\|ZP_02480510.1\| pyridoxamine 5'-phosphate oxidase [Burkholderia pseudomallei 7894] gi\|134248915, gi... - gi\|134279715\|ref\|ZP_01766427.1\| pyridoxamine 5'-phosphate oxidase [Burkholderia pseudomallei 305], g... gi\|167901568 - gi\|167901568\|ref\|ZP_02488773.1\| pyridoxamine 5'-phosphate oxidase [Burkholderia pseudomallei NCTC 13... gi\|167814541 - gi\|167814541\|ref\|ZP_02446221.1\| pyridoxamine 5'-phosphate oxidase [Burkholderia pseudomallei 91] gi\|167823014 - gi\|167823014\|ref\|ZP_02454485.1\| pyridoxamine 5'-phosphate oxidase [Burkholderia pseudomallei 9] gi\|225935107, gi... - gi\|226192857\|ref\|ZP_03788470.1\| pyridoxamine 5'-phosphate oxidase [Burkholderia pseudomallei Pakista... gi\|237811101, gi... - gi\|237811101\|ref\|YP_002895552.1\| pyridoxamine 5'-phosphate oxidase [Burkholderia pseudomallei MSHR34... gi\|83678485, gi\|... - gi\|83678485\|ref\|ZP_00940211.1\| COG0259: Pyridoxamine-phosphate oxidase [Burkholderia pseudomallei 40... gi\|254181557, gi... - gi\|99907861\|ref\|ZP_01315680.1\| hypothetical protein Bpse1_03004980 [Burkholderia pseudomallei 1655],... PDXH_BURP0 - Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Burkholderia pseudomallei (strain 1106a) GN=pdxH PE=... gi\|242139749, gi... - gi\|82535036\|ref\|ZP_00894059.1\| hypothetical protein Bpse110_02003673 [Burkholderia pseudomallei 1106... PDXH_BURP1 - Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Burkholderia pseudomallei (strain 1710b) GN=pdxH PE=... PDXH_BURPS - Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Burkholderia pseudomallei GN=pdxH PE=3 SV=2	268.0	[0..2]	[212..12]
PDXH_CUPNH - Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 4...	268.0	[0..3]	[212..13]
gi\|67679726, gi\|... - gi\|90289673\|ref\|ZP_01209428.1\| hypothetical protein Bpse17_02005561 [Burkholderia pseudomallei 1710a...	267.0	[0..2]	[212..8]

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Predicted Domain #1

Region A:
Residues: [1-213]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSLAKIED FPSDPVEFFK EILQEAAKGH PDGFIQEMNL ATVDEEFGVL NRTVLYRGLT  60
   61 QDNCVFYITH RYVRNFKNLQ ANPKACITFY MPDVKDKAGN QNAWQVRLIG ATAVELDQSE 120
  121 MDALWAKENL AAQIRGHICP CGEPINYDDL KAKHDQFLLD HRGKSIERPA SYTAWKFQPQ 180
  181 RWDFLKVGLD QIADRVQYRL QKDGKWKSMH VST

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	68.09691
Match:	1g76A
Description:	Pyridoxine 5'-phoshate oxidase (PNP oxidase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.130848055218245	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: