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View Structure Prediction Details

Protein: CG9657-PA, FBpp0...
Organism: Drosophila melanogaster
Length: 601 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9657-PA, FBpp0....

Description E-value Query
Range
Subject
Range
gi|91084087 - gi|91084087|ref|XP_968449.1| PREDICTED: similar to sodium/solute symporter [Tribolium castaneum]
376.0 [0..9] [574..5]

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Predicted Domain #1
Region A:
Residues: [1-126]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHVEELRASL QSFGWPDYLV FCLMLAICAV IGIYFCLQLR LESRKQKANG SEEAASSAAS  60
   61 YLVGGRQMKI FPITMSLISS FISGITLLGT PTEVYLYGAQ YMYIMGSLVL MGFCMYYFFL 120
  121 PVFHEL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [127-246]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLISTYKYLE QRYNRSLRLF GSVMFIVASL LWLPIVIYVP AIAFNQATGV NIHIVTPIVC  60
   61 VVCIFYTCIG GLKAVVWTDV IQTLIMFGAM ALVLIKGTLD IGGPGVVWQK AQETARLEVP 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [247-450]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NFSADLSERY TFYSLVLGGV AHWLKSNAIS QNMIQRYLSL PTLRDARIAI WTFIAGVLAF  60
   61 LMICGYTGLL IYATYSQCDP LETKLAQRND QLLPLLVMDT LGSYPGLPGV FVAGVFSAAL 120
  121 SSLSTGLNSL SAVVLEDFVK TFRKSPLTEG QTAFVMRSVV VVFGIIFVAL VFAVEKLGAV 180
  181 LQLTITLSSV ANGPLLGIFT AGVM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [451-601]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPWVNSKGAL LGGFSSLIVM AWMCVSAQRD LVTGDLVYKR KPYSTMGCNY TFAGEPREFA  60
   61 SLALDGAISS VPSAPFQLYR ISYLYFTLFG ALVTIVVALV TSLLLRETDL DGVDTRLLTP 120
  121 FVRRWLERRR HRRSKIPDSG QKSSNKQETK T

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle