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View Structure Prediction Details

Protein: CG14425-PA, CG14...
Organism: Drosophila melanogaster
Length: 319 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG14425-PA, CG14....

Description E-value Query
Range
Subject
Range
gi|81253646 - gi|81253646|ref|ZP_00878182.1| hypothetical protein MtubC_01002206 [Mycobacterium tuberculosis C]
gi|123215916 - gi|123215916|ref|ZP_01685274.1| hypothetical protein MtubF_02002424 [Mycobacterium tuberculosis F11]
158.0 [0..4] [315..228]

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Predicted Domain #1
Region A:
Residues: [1-117]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLYHQQYHQ QQTQQQRLGN VAAHNISPNG SNNNINTSNT NNINFNTIRQ NGVAALHYLQ  60
   61 EQLQLQQPQD QQSQQQQPLT MPSSPPFQQQ SRQSHHNGSS STLGNQLLAI SNNNSFN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [118-319]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NNSNQSNSFT GNYSNGSAFT SNGAISGSNF PNNPTSSGNF TNNSTNSNPT NSGHFASNLA  60
   61 GSSNFTNHLS GSNNYTNSNG NFTSNAASSS NFSNNAASST NYSKNCSSGV VGNSDPDSCS 120
  121 RKHTTNTNNH HTSPQHDFSF NMSTTEQELH QQTLKLQQLH LNNSFNNTTA AATTSAAAST 180
  181 STSTTATASS TNSANVGFLW RT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle