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View Structure Prediction Details

Protein: nullo-PB
Organism: Drosophila melanogaster
Length: 213 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nullo-PB.

Description E-value Query
Range
Subject
Range
gi|45549117, gi|... - gi|54041629|sp|P32845.3|NULLO_DROME RecName: Full=Protein nullo, gi|45549117|ref|NP_511067.2| nullo ...
438.0 [0..1] [213..41]
gi|1832267 - gi|1832267|gb|AAB46472.1| Drosophila sechellia nullo
382.0 [0..7] [200..1]
gi|1832259 - gi|1832259|gb|AAB46468.1| Drosophila mauritiana nullo
375.0 [0..7] [200..1]
gi|1832255 - gi|1832255|gb|AAB46466.1| Drosophila lutescens nullo
345.0 [0..7] [200..1]
gi|1832094 - gi|1832094|gb|AAB46423.1| nullo gene product
341.0 [0..7] [200..1]
gi|1832092 - gi|1832092|gb|AAB46422.1| nullo gene product
335.0 [0..7] [181..1]
gi|1832263 - gi|1832263|gb|AAB46470.1| Drosophila orena nullo
291.0 [0..7] [166..1]

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Predicted Domain #1
Region A:
Residues: [1-213]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSTHSAEKV KSVEDSTSPA NPGIFCTPLP GFISNIQRLV LRKLSISARK QKRLNKRSKH  60
   61 LLRPMPRCSS FGSCGTLLTP TKKSASNIAD RRYAQWKCSF EHLAQKQPRL HDISEAMTGQ 120
  121 TTPRGFPSHT DPKRCLMVMD SSSPESPLYD MVGGQKVRRR LSLRSHALVR RPSARQKAEQ 180
  181 AKLDAQFQRD LRDLEDYYGG FHFAQRRERL VKV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle