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View Structure Prediction Details

Protein: cm-PA, FBpp0304594
Organism: Drosophila melanogaster
Length: 415 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cm-PA, FBpp0304594.

Description E-value Query
Range
Subject
Range
gi|42554497, gi|... - gi|46130854|ref|XP_389158.1| hypothetical protein FG08982.1 [Gibberella zeae PH-1], gi|42554497|gb|E...
414.0 [0..1] [415..1]

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Predicted Domain #1
Region A:
Residues: [1-415]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIHSLFIVNS GGEVFLEKHW RSVVSRSVCE YFLDAQRAAP YDVPPVIATP HYYLITVQRD  60
   61 TVSLVAACKQ EVPPLFVIEF LHRVVDTFQD YFGDCSESVI KDNYVVVYEL LDEMLDNGFP 120
  121 LATESNILKE LIKPPNILRT IANTVTGKSN VSTTLPSGQL SAVRWRRSGV RYTNNEAYFD 180
  181 VIEEVDAIID KSGSTVFAEI QGHIDCCIKL SGMPDLTLSF MNPRLFDDVS FHPCVRYKRW 240
  241 EAERLLSFIP PDGNFRLMSY HISSQSVVAI PIYIRHNFSI KTGEQGRLDL TIGPRNTLGR 300
  301 TVDKVKLELT MPRCVLNCLL TPNQGKYTFD SVTKTLSWDV GRIDVSKLPN IRGSVSITPG 360
  361 TTNIDANPSV NVQFQISQLA VSGLKVNRLD MYGEKYKPFK GVKYLTKAGK FQVRM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 112.0
Match: 1w63M
Description: AP1 clathrin adaptor core
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle