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View Structure Prediction Details

Protein: CG3842-PA, CG384...
Organism: Drosophila melanogaster
Length: 406 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG3842-PA, CG384....

Description E-value Query
Range
Subject
Range
gi|54643922, gi|... - gi|54643922|gb|EAL32665.1| GA17725-PA [Drosophila pseudoobscura], gi|125983682|ref|XP_001355606.1| G...
294.0 [0..1] [405..1]

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Predicted Domain #1
Region A:
Residues: [1-406]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEAATPPGS VPGTVFPPGF DPTAESVEKT LCFRGFWAWA VLIFLIVLGI LLFMWLLRKC  60
   61 IQGPAYRKAN RIDGKVVIVT GCNTGIGKET VLELAKRGAR VYMACRDPGR CEAARLDIMD 120
  121 RSRNQQLFNR TLDLGSLQSV RNFVERFKAE ESRLDILINN AGVMACPRTL TADGFEQQFG 180
  181 VNHLGHFLLT NLLLDRLKHS SPSRIVVVSS AAHLFGRINR EDLMSEKNYS KFFGAYSQSK 240
  241 LANILFTLKL STILKDTGVT VNCCHPGVVR TEINRHFSGP GWMKTALQKG SLYFFKTPKA 300
  301 GAQTQLRLAL DPQLEGSTGG YYSDCMRWPL FPWVRNMQTA DWLWRESEKL LGLPPLEPPP 360
  361 PVQSPTQNGN GTQNGNGSSS ASASASSNNP ASREMQSVET VVVNRS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.39794
Match: 2p68A
Description: No description for 2p68A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle