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View Structure Prediction Details

Protein: CG33080-PA
Organism: Drosophila melanogaster
Length: 925 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG33080-PA.

Description E-value Query
Range
Subject
Range
gi|28316878 - gi|28316878|gb|AAO39462.1| RH30917p [Drosophila melanogaster]
892.0 [0..1] [925..1]

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Predicted Domain #1
Region A:
Residues: [1-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQPSQSGAA QALNGQHPEL AFADADTDGD ERLEEHGQEQ EQLQLLGAMP RKQSLSERRN  60
   61 VDLPHLKMVN EKEPESATPS PEAFAPGLRR NSISMPSGIN ALDLEALRLR HQMQPQDALH 120
  121 EEIIADDATS SLGTPATPDT PGTTAPTTTA NTPDKAINFA NDDSDDEFGN ARRPVHRDRF 180
  181 RSRRRASIAP LPALRLNSKE MLASDFDSHS LASNQASITS VNSLASLLRE KMQAFPQLIR 240
  241 KKKRETKDYK IKIFVIIMFF IIIFLIGYAY VAYHQQVLTR SYFQKIKFNS 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [291-925]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HDRIFRILSH EDKEVISGQL GVTLGFDTAP FHCLEEQRRS DGSVCIEWNG VARLHLNFED  60
   61 KGVFRCYTLQ WQALTPGLLP TDCYELKRDN GLWFGGGVTK GQEWSLSYAN FDFAPYASGD 120
  121 SKIHQFGNGV KRYFINSIGV AMQVSEKTPL QLGVNRTENR FCLRAANDEF TFVNHLTPLP 180
  181 QLDYRICTTE DMRSLHMLMT QQSLWDGLKE QEFKVLHSLL EEPVWRIPHT ELPESLNESA 240
  241 ICDYSESAIA MGLGHIVINE FWQENIGDFT VDKARFPTLK DTIDVLHRRG FKVVLTIQPF 300
  301 ISTDSANFKD AVKRKLLIYE RHSERSIPAL TRYKSSSSAG VLDITNNASV PWLLEKLQRL 360
  361 KEEYGVQSFY LDLGTGYNLP HYYQCRQTLD NPDTYARLFT ASLEGAGLMA VSTASVVPKP 420
  421 PTFLSTPPAN ATWEGLRETL GAVLNYGVIG YPFVLPGVIG GDYLLQRPLS KMVSFYSLSQ 480
  481 PPLPDPELFI RWLQLATFMP AMQFSHLPSE YRSDLVTRVA QELKEVRQLI VIPLLKKYLN 540
  541 PSMNEGLPLV RPLWMMDPHD PACLIVSDEF SVGEELIVAP ILHANREERE VYLPQGVWKD 600
  601 GIDGSLRKGS RWMHGYRVPK DKIAYFRKMP DNTRF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 113.0
Match: 1we5A
Description: Crystal Structure of Alpha-Xylosidase from Escherichia coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
glucosidase activity 3.36236519085847 bayes_pls_golite062009
alpha-glucosidase activity 2.3919781440515 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle