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View Structure Prediction Details

Protein: FBpp0305388, Tip...
Organism: Drosophila melanogaster
Length: 541 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0305388, Tip....

Description E-value Query
Range
Subject
Range
gi|4185890 - gi|4185890|emb|CAA21829.1| EG:EG0007.7 [Drosophila melanogaster]
510.0 [0..33] [541..1]

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Predicted Domain #1
Region A:
Residues: [1-147]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKINHKYEFD DDVASICEST AALTEGCRLP VRMHKTDDWP LAEIVSIKEL DGRRQFYVHY  60
   61 VDFNKRLDEW VNEEDLYTRK VQFPRRDGSQ TGTSTGVTTP QRHHSLAGSV SRPTSPQHPG 120
  121 SGALAAIPQT PTGASGSVPP PAGIPNS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.39794
Match: 2ekoA
Description: No description for 2ekoA was found.

Predicted Domain #2
Region A:
Residues: [148-236]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VAPPGTPSSG GELVNGNNLA AALQKRINRK RKNHGGSAHG HHSLTSQQQQ SHPHPTTPQT  60
   61 PTATPVHVTG DGLISGAAND DGDGSQDGK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [237-541]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPTPRQSGSM VTHQDDVVTR MKNVEMIELG RHRIKPWYFS PYPQELCQMP CIYICEFCLK  60
   61 YRKSRKCLER HLSKCNLRHP PGNEIYRKHT ISFFEIDGRK NKVYAQNLCL LAKLFLDHKT 120
  121 LYYDTDPFLF YVMTEFDSRG FHIVGYFSKE KESTEDYNVA CILTMPPYQR KGYGKLLIEF 180
  181 SYELSKFEGK TGSPEKPLSD LGLLSYRSYW AQTILEIFIS QNPSTDGEKP TITINDICEC 240
  241 TSIKKEDVIS TLQNLNLINY YKGQYIVCIN RVIIEQHRRA MDKRKIRIDS KCLHWTPKDW 300
  301 SKRSK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 111.0
Match: 2ou2A
Description: No description for 2ou2A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle