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View Structure Prediction Details

Protein: Parg-PA
Organism: Drosophila melanogaster
Length: 768 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Parg-PA.

Description E-value Query
Range
Subject
Range
FBpp0298281, FBp... - type=protein; loc=X:complement(3563162..3564620,3564688..3565400); ID=FBpp0298281; name=Parg-PC; par...
968.0 [0..46] [768..1]

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Predicted Domain #1
Region A:
Residues: [1-64]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQEFRSHLIF PIFQKVYQST ANRRRASASV LTNRLGKALC LNCARMSKSP DGGISEIETE  60
   61 EEPE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [65-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLANSLDDSW RGVSMEAIHR NRQPFELENL PPVTAGNLHR VMYQLPIRET PPRPYKSPGK  60
   61 WDSEHVRLPC APESKYPREN PDGSTTIDFR WEMIERALLQ PIK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [168-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TCEELQAAII SYNTTYRDQW HFRALHQLLD EELDESETRV FFEDLLPRII RLALRLPDLI  60
   61 QSPVPLLKHH KNASLSLSQQ QISCLLANAF LCTFPRRNTL K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [269-414]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RKSEYSTFPD INFNRLYQST GPAVLEKLKC IMHYFRRVCP TERDASNVPT GVVTFVRRSG  60
   61 LPEHLIDWSQ SAAPLGDVPL HVDAEGTIED EGIGLLQVDF ANKYLGGGVL GHGCVQEEIR 120
  121 FVICPELLVG KLFTECLRPF EALVML

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [415-485]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GAERYSNYTG YAGSFEWSGN FEDSTPRDSS GRRQTAIVAI DALHFAQSHH QYREDLMERE  60
   61 LNKAYIGFVH W

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [486-596]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTPPPGVAT GNWGCGAFGG DSYLKALLQL MVCAQLGRPL AYYTFGNVEF RDDFHEMWLL  60
   61 FRNDGTTVQQ LWSILRSYSR LIKEKSSKEP RENKASKKKL YDFIKEELKK V

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [597-768]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RDVPGEGASA EAGSSRVAGL GEGKSETSAK SSPELNKQPA RPQITITQQS TDLLPAQLSQ  60
   61 DNSNSSEDQA LLMLSDDEEA NAMMEAASLE AKSSVEISNS STTSKTSSTA TKSMGSGGRQ 120
  121 LSLLEMLDTH YEKGSASKRP RKSPNCSKAE GSAKSRKEID VTDKDEKDDI VD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle