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View Structure Prediction Details

Protein: Csat-PA, FBpp0311754
Organism: Drosophila melanogaster
Length: 357 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Csat-PA, FBpp0311754.

Description E-value Query
Range
Subject
Range
gi|92872427, gi|... - gi|92872427|gb|ABE81054.1| Protein of unknown function DUF6, transmembrane [Medicago truncatula], gi...
145.0 [0..1] [342..3]

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Predicted Domain #1
Region A:
Residues: [1-67]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSIHMNANT LKYISLLTLT LQNAILGLSM RYARTRPGDI FLSSTAVLMA EFAKLITCLF  60
   61 LVFNEEG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [68-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KDAQKFVRSL HKTIIANPMD TLKVCVPSLV YIVQNNLLYV SASHLDAATY QVTYQLKILT  60
   61 TAMFAVVILR RKLLNTQWGA LLLLVMGIVL VQLAQTEGPT SGSAGGAAAA ATA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.18
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [181-357]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASSGGAPEQN RMLGLWAALG ACFLSGFAGI YFEKILKGAE ISVWMRNVQL SLLSIPFGLL  60
   61 TCFVNDGSRI FDQGFFKGYD LFVWYLVLLQ AGGGLIVAVV VKYADNILKG FATSLAIIIS 120
  121 CVASIYIFDF NLTLQFSFGA GLVIASIFLY GYDPARSAPK PTMHGPGGDE EKLLPRV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle