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View Structure Prediction Details

Protein: FBpp0070397, CG2...
Organism: Drosophila melanogaster
Length: 397 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0070397, CG2....

Description E-value Query
Range
Subject
Range
gi|125982950|ref... - GA15522-PA [Drosophila pseudoobscura], GA15522 [Drosophila pseudoobscura pseudoobscura]
gi|125982950, gi... - gi|54643554|gb|EAL32297.1| GA15522 [Drosophila pseudoobscura pseudoobscura], gi|125982950|ref|XP_001...
gi|194108706, gi... - gi|195168864|ref|XP_002025250.1| GL13385 [Drosophila persimilis], gi|194108706|gb|EDW30749.1| GL1338...
435.0 [0..1] [397..1]

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Predicted Domain #1
Region A:
Residues: [1-216]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACLNTLKQE IKTLEKIFPK NHERFQILNS SVDELLCRFI DKNGKRYDIH ANITETYPSS  60
   61 PPVWFAESEE TSVTNAVQIL SNTNGRDNHV INQVGILLRE LCRLHNVPLP PDIDNLALPL 120
  121 QTPPPSASPL RCEQRPGGGG AGGGGGPHGN EETDSDQEEI EDPIGESEQE SEGDEDLPLE 180
  181 MDDVRSTSKK DDMEVEHLAT LEKLRQSQRQ DYLKGS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.99
Match: 1tteA
Description: The Structure of a Class II ubiquitin-conjugating enzyme, Ubc1.
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [217-397]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSGSVQATDR LMKELRDIYR SDAFKKNMYS IELVNESIYE WNIRLKSVDP DSPLHSDLQM  60
   61 LKEKEGKDSI LLNILFKETY PFEPPFVRVV HPIISGGYVL IGGAICMELL TKQGWSSAYT 120
  121 VEAVIMQIAA TLVKGKARIQ FGATKALTQG QYSLARAQQS FKSLVQIHEK NGWFTPPKED 180
  181 G

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.522879
Match: 1zuoA
Description: Structure of Human Ubiquitin-Conjugating Enzyme (UBCi) Involved in Embryo Attachment and Implantation
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle