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View Structure Prediction Details

Protein: fs(1)K10-PA
Organism: Drosophila melanogaster
Length: 463 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fs(1)K10-PA.

Description E-value Query
Range
Subject
Range
gi|113461768, gi... - gi|113461768|ref|YP_719837.1| large adhesin [Haemophilus somnus 129PT], gi|112823811|gb|ABI25900.1| ...
282.0 [0..1] [463..1416]

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Predicted Domain #1
Region A:
Residues: [1-370]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSKNQFYQN WTMQSQQQHP HQMQQQFQQQ QQPNLQHRNN QSNNNNCNNN PRAAAAPYRK  60
   61 PFRSGKINSG PGGNGNGNRV NGNNQMMFSS SQMPSDPLYI DFSSPPPGFK HNQVGSPKKK 120
  121 SMKGIKQQQH PSPNQQQPPS PNQQQHPSPN QQQHPSPNQQ QHPNSNQQQH LSPNQQQGKM 180
  181 NNQNNNHMNQ SQQPFNNQMN GSDWQRHPGN NPNQIRGGFN GFQRGPPPNR PPPRLMMGPP 240
  241 MGPMGPGPRG PGPMGPGGPY PQMPFPPPVP GMRGPGPMGP MGGPPPPPPP LFMRRNGPGP 300
  301 GPMMGVPPPM HMMGPRMPPR GIPPVGPYGP MNMNGGRIMK PNPKLIKQVV KGKSSIKTLK 360
  361 NLINQYPIEK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.69897
Match: 1y0fB
Description: No description for 1y0fB was found.

Predicted Domain #2
Region A:
Residues: [371-463]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PWVTDEIRSE HDKKVDIENR LKGHKDDELF AQYKGQRDKF VSLYEAAREE YLKQEAATVK  60
   61 AKDAKSDKDK NAISSQSAAP KAGSAKDATI PNP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle