| Protein: | Rbcn-3B-PA, FBpp... |
| Organism: | Drosophila melanogaster |
| Length: | 1525 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Rbcn-3B-PA, FBpp....
| Description | E-value | Query Range |
Subject Range |
|
|
964.0 | [0..10] | [1514..1] |
|
Region A: Residues: [1-310] |
1 11 21 31 41 51
| | | | | |
1 MVSTNLVVPV VLWGPTAPTH CISSVFLSDD QFTLVTGCYD GQICLWQVEP TTLKMSPRCL 60
61 LVGHSAPVLC LVRASLLPEN NFLVSSSENG EMCTWDLTDG KCMEAVKLPQ VHTQIQSYHT 120
121 ANSEDVRLFC IGYYAEIMVM DPFSLEVIYV LSSKVKPDWI SAIHVLRPMR RKDDVVLAIT 180
181 TTGTVKVWTL TGNENKHAEP IYENESKEIR CLNAITMNCC AQNQRTVLLV CTKYWQIYDA 240
241 GDFTVLCSVI APARERWQGG DFITSDRVML WTDEGKGYLY KLPANCIPDN KEFHSKSVVR 300
301 DAPYLYYVLQ
|
| Detection Method: |  |
| Confidence: | 20.0 |
| Match: | 2pm9A |
| Description: | No description for 2pm9A was found. |
|
Region A: Residues: [311-387] |
1 11 21 31 41 51
| | | | | |
1 HAGDKVLSCP PAMKLLQGAG GQHNLLRGDS EGYISVWNVP EVPLDNISIL QAKQMPPRPL 60
61 KPHVCTSLVE AWSIMDP
|
| Detection Method: | |
| Confidence: | 72.69897 |
| Match: | 1vyhC |
| Description: | PAF-AH Holoenzyme: Lis1/Alfa2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [388-745] |
1 11 21 31 41 51
| | | | | |
1 PPVGILDQLS RITESPVKLT SSIYLPQQSR LVIGREDGSI VIVPATQTVM MQLLVGIKQN 60
61 FSDWPSHQIL YGHRGRVNCL LCPSMIHSRY EKSHLLSGGI DFAVCLWDLY SGSLLHRFCV 120
121 HAGEITQLLV PPESCSPRIL KCICSVASDH SVTLVSLQER KCVTLASRHL FPVVTIKWRP 180
181 LDDFLIVGCS DGSVYVWQME TGHLDRVLHG MLAEEVLSAC DEQAEDGGSG GGGGSNGASA 240
241 SEMGMANPAV HFFRGLKSRN MNAIRHATQR GITQLQQLQG HNQGNFDFLM KHRSNPLVIQ 300
301 GLRTNPKDAE SHILFFDIEG LIFELHSEEY AQMTPATLES LGVHLQNPKD GKSMHLDA
|
| Detection Method: | |
| Confidence: | 66.0 |
| Match: | 2ovpB |
| Description: | No description for 2ovpB was found. |
|
Region A: Residues: [746-808] |
1 11 21 31 41 51
| | | | | |
1 SKKIGDFFNK VKNKAVDVEK ILKDKDKHGL VQKFKEKTEI VEKKVQAKVE SLQKAVEPHE 60
61 EQQ
|
| Detection Method: | |
| Confidence: | 4.221849 |
| Match: | 2ojhA |
| Description: | No description for 2ojhA was found. |
|
Region A: Residues: [809-918] |
1 11 21 31 41 51
| | | | | |
1 DLKSKIASKM EVTHVMEVAQ LLLSLLHSWG LDPHLDKMCE TRLGLLRPIV PISYGVLSKA 60
61 GYMSLLLPTW QNNYAIPPGI QLPSSSKKRP LPEELQRLEH LTAVFTSRLH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [919-1137] |
1 11 21 31 41 51
| | | | | |
1 WELSTTLTTN HILALVAMSN TLLSMSAASF LPDSEKHKKL QRLAQRTDST LSNEEEREEL 60
61 MAHHISQIKH AWSLLATHHC FLLPDKIEAL EPKKFKRPQV EMMVKRWQHH CIEIREAAQQ 120
121 ILLGELTRMG KKGRKQLVES WAQYLPLYTH TEPIVGAQQQ LALISQPASG GAGSGSGGNG 180
181 GVGVGVSGGG GAGSGSGPGG SVPGGDAHQD EDYEEEEEE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1138-1198] |
1 11 21 31 41 51
| | | | | |
1 IIRKPSSLSE LKRKQTTAVI LLGVIGAEFG QDISQESPNH RGSISMATGA NLTSGVAGGE 60
61 R
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1199-1291] |
1 11 21 31 41 51
| | | | | |
1 RKSSVVEGFG IANNLARLTS MALAHLLYAP PSPKLPQYTP LRRAAIDLLG RGFTVWEPYL 60
61 DVSKVLLGLL EISCEGKAVP NLNYKLPLTP QAD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1292-1525] |
1 11 21 31 41 51
| | | | | |
1 ACRTARHALR LIATARPAAF ITTMAREVAR YNTMQQNAQS INTPLTQSVL HKAKGEILQC 60
61 VEMLIDKMQS EIAGLLVEVM DIALHCVDGN ELKNRGLAEL CPAICKFNQI SHCAQTRRIA 120
121 VGANSGNLAI YELRQNKCQM IPAHTHPITS LAFSPDGKYL VSYSCAENRL SFWQTSTGMF 180
181 GLGQSQTRCT KGYSTAPIPD VSRLNPMRLA KLVWINNRTV TLMLADGSET RFNV
|
| Detection Method: | |
| Confidence: | 6.09691 |
| Match: | 1k32A |
| Description: | Tricorn protease; Tricorn protease N-terminal domain; Tricorn protease domain 2 |
Matching Structure (courtesy of the PDB): |
|
