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View Structure Prediction Details

Protein: CDC45L-PA
Organism: Drosophila melanogaster
Length: 575 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDC45L-PA.

Description E-value Query
Range
Subject
Range
gi|4185283, gi|6... - gi|6753366|ref|NP_033992.1| cell division cycle 45 homolog (S. cerevisiae)-like [Mus musculus], gi|4...
803.0 [0..1] [575..1]

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Predicted Domain #1
Region A:
Residues: [1-269]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVQDLRNDF YRQLVGKRIL IVVNYDIDAI CASRILQALF KYDHMLYTVV PIMGVTGLKR  60
   61 AYGEHQGDVK YVVLVNCGGC VDIVELLQPS DDVTFFICDS HRPLDVCNIY SDRQVCILGD 120
  121 ASLEENIPAF ETIFYDSEGE DEDEDESSDT EQQHDDSGAG ESDQEDQAPR SRKLSRLERH 180
  181 EQRILKQRAR RQWESERDRI MFEYTQFSYY GRSAALMVFE LAWKLSKDNM DLLWWAIVGI 240
  241 TEQLLLGKIE SGAYTLELEQ IQSHVSRLT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [270-403]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NKTNDQNTMS ASKITFENDL HLVLYRHWPV TESMRYSRYS SCQLKLWTLR GEKRLHELLL  60
   61 EMGLPLVHAR QTYGAMDLVL RKEFFSMVER LAEKYDIADI VYGTFTLSYG YRSRYAAADY 120
  121 VYALLAIMES VKKH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [404-575]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTPEDCFLEA SDALSRQHKQ LLSAGIDQAK LLHAAVFRQV QSSLEARQVH SAGSFFYYVL  60
   61 QEEHAFFSYP YALGLLARFL LRGHVATSRA RQASDLPLIA SCPLNASEGM CLLVGIVPVR 120
  121 EDSPRNFFGK AFEQAAQKSG VALLQDFFEP AVVQLRQSDL TRFLDSLTVL LA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle