YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG2118-PA, FBpp0...
Organism: Drosophila melanogaster
Length: 698 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG2118-PA, FBpp0....

Description E-value Query
Range
Subject
Range
gi|109043037 - gi|109043037|ref|XP_001096717.1| PREDICTED: similar to methylcrotonoyl-Coenzyme A carboxylase 1 (alp...
651.0 [0..8] [698..102]

Back

Predicted Domain #1
Region A:
Residues: [1-698]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYARLLRNFG ANARCFATEA SPKVRPISKI LISNRGEIAC RVIRTARKLG VRTVAVFSDP  60
   61 DEKSMHTQLA DESYRVGEAA SSASYLRGER ILDIAKRSGA QAIHPGYGFL SESVEFAELC 120
  121 QREGIIFMGP PSSAIRDMGI KSTSKAIMAA AGVPIINGYH GDDQSDECLQ READKIGFPL 180
  181 MIKAVRGGGG KGMRIAEKPD DFLTALNSAR TESEKSFGDS SVLLERYVRS PRHVEVQVFA 240
  241 DQYGDAVYLW ERDCSVQRRH QKIIEEAPAP GLSEDLRREL GEAAVRAAKA VGYVGAGTVE 300
  301 FILDKEDLSF HFMEMNTRLQ VEHPITEMIT GTDLVEWQIR IAAGEPLPLK QSEITRRGHA 360
  361 FEARIYAENP RGGFLPGAGP LRYLSTPQPS NNVRVETGVR EGDEVSVHYD PMIAKLVVWG 420
  421 ENRTQALNSL VARLGEYHIS GLDTNINFLI DLASHPEFQL ANVHTGFIDE QFDTLFPPII 480
  481 ISPQQVSQAA LALVLNELQA AFRNGNKDQD PFVATPNARL NYSLVRRYDL KANEKVYSVA 540
  541 VKFDGEDMQI QVDNGDWQDA KVERVQDGSR LKIRANINSN VTTYNASIDG TSVSLFSESG 600
  601 KVDFEVGQPK FLSAQGDQLG AVGSRIVAPM PGILEKVLVK PGDKVKKGEN LAVLIAMKME 660
  661 HILKAPKDAT IKSIGGAAGD NVAKGAAVIT FVDEEVEK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 161.0
Match: 2qf7A
Description: No description for 2qf7A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle