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View Structure Prediction Details

Protein: FBpp0292438, CG2...
Organism: Drosophila melanogaster
Length: 623 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0292438, CG2....

Description E-value Query
Range
Subject
Range
gi|91084087 - gi|91084087|ref|XP_968449.1| PREDICTED: similar to sodium/solute symporter [Tribolium castaneum]
359.0 [0..22] [616..7]

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Predicted Domain #1
Region A:
Residues: [1-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTTTTTTTT MASAVSSASQ DLRFGLTDYF VFVIMLGASA GIGVYFGFFS KSKNTTEEYL  60
   61 RGGKKMQTLP IAISLVASQL SGIAIMSIPA ESYTYGFNYI FVVLAMLVVI PILIYIIVPV 120
  121 FYENNVSNCY EYLEMRFNKR TRQLVTFFFV TNSFLMLPVY MFIPSLAFAQ VTGMNIHLIN 180
  181 VMVSSICIFY TMLGGIKAVV WTDVVQGAIM LLSVVAVGVL GTIRSGGMFT VMERASD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [238-512]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGRFNFDFGL DPRIRMTFWG ATMGGIFMWT GHIGLNQSCV QRIVSLPSYS HAKKSLIVSG  60
   61 LGFLIISFFN TISGIIMFAR YYGCDPMLAG LVSKPDKMMP FFVQDIMGHL AGMPGVFISC 120
  121 VFSAALSSLS ATLNSLAGVV YFDYIKPRIR HTEARANWAM KLIVVVMGGY CILGGFMVQN 180
  181 FNSILQTVVT ITGINTGAVV GVFLLGMFVP RCNAKTAVTS IIVSVVAMVW IIANGQMNFK 240
  241 SGLIKYEVLP NSLDQCEARG LYMIAEAINK TDFTP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [513-623]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VTMKPPSGAP VTTAFHSDRD FSLYDISFYW YKVLGSALVF LCAIPLSYIW RPDENEKQNP  60
   61 KLYSPFVRKF LSLPVTDQDL EEVPLRGSKV AATPDLRIEP TEKEKQTVTE P

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle