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View Structure Prediction Details

Protein: gi|7302090, gi|2...
Organism: Drosophila melanogaster
Length: 626 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7302090, gi|2....

Description E-value Query
Range
Subject
Range
gi|91084087 - gi|91084087|ref|XP_968449.1| PREDICTED: similar to sodium/solute symporter [Tribolium castaneum]
378.0 [0..23] [614..7]

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Predicted Domain #1
Region A:
Residues: [1-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSVSNLAS TVATATTATL EDLHFSLTDY IVFSLMLSAS AGIGVYFGFF SKAKNTTEEY  60
   61 LQGGKRMPTL PVAISLVSSQ LSGVAMMSVP AETYSFGFNM IFVVWAMVLS VPVLIYIIVP 120
  121 VFYDNNVSNC YEYLELRFSK RTRQLVTITF ILNQFLMLPV YMFVPSLAFS QVTGYNIHLI 180
  181 NTVVSSICVF YTMLGGIKAV VWTDVVQGSV MLISVVLVAI LGTSNTGGIT NVLENAAEGG 240
  241 RFDFRQVN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [249-450]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GFGIDPRLRL TFISGMASGL LMWTGKLGLD QSCVQRIVSL PSYGHAKRCL LMAGVGFLLI  60
   61 MSFTCFTGII MFAYYYGCDP IQAGLVSKPD KLMPFFIQDI MGHMMGMPGV FISCVFSASL 120
  121 SSLSASLNSF AGVVYFDYIK PRINHSEAKA NATMKLVIVV MGAYCIVGGF IVQNFNSIIQ 180
  181 TMWTITGINM GAVVGVFCLG MF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [451-626]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPRCNAKVAV SGIAFSCLVM LWIIINGQMN FKAGLIKYDP LPNGLDQCEA KGFEVILNAI  60
   61 RNKNVTNVGT TAIPSLEAPK ELTTAFDSNR DFSIYDTSFY WYKVLGALLV FAWAIPMSYV 120
  121 WPLDKEEKQN PKLYSPFVRS MLNKPSPVLE LEELPLKTPL SEEQIKEKEN GSATEA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle