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View Structure Prediction Details

Protein: Ctr1C-PB
Organism: Drosophila melanogaster
Length: 238 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ctr1C-PB.

Description E-value Query
Range
Subject
Range
Ctr1C-PA - The gene Copper transporter 1C is referred to in FlyBase by the symbol Dmel\Ctr1C (CG15551, FBgn0062...
182.0 [0..1] [238..1]

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Predicted Domain #1
Region A:
Residues: [1-76]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHHGVDASE GHVHHHASHG SPEPVPPSSG HEGHHSPEMN HHGNHGEHTK HGHHEGGAHD  60
   61 MSMAMFFHTG DSETIL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.39794
Match: 1pf3A
Description: multi-copper oxidase CueO
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [77-238]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FKFWRTESAM ALTLSCLLIF MVAVLYEALK FFREWLFSWD RKRLAGGRDQ YNRPRRYREA  60
   61 NYNYNQPTYP PRTNQQSGTQ HTHHHVQENT PPAGRTTKLK VFCSGMHILQ TFLHVLQVLI 120
  121 SFLLMLVFMT FNVWLCVAVL LGAGVGYYIF CAFRTNVQEH CN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 52.283997
Match: PF04145.6
Description: No description for PF04145.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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