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View Structure Prediction Details

Protein: CG31012-PA
Organism: Drosophila melanogaster
Length: 545 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG31012-PA.

Description E-value Query
Range
Subject
Range
gi|39592304, gi|... - gi|39592304|emb|CAE75525.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae], gi|187020927|em...
gi|157762282 - gi|157762282|ref|XP_001673483.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae AF16]
229.0 [0..4] [529..1090]

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Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTTNSSNSS TTSVTTQQQK EQIGGSSSTT SKVYIKKTGS SSNSTTSSTT TASSSAGRKE  60
   61 SFGSRDSLND ILSETGLPTG N

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [82-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VAAQRKSLEN KNLDLTKPPG VGASVSIGQQ RSSTSSATTS SATTVATGLT SSSVSKSMEN  60
   61 MLDEKVKSPP PPVLSKKPSV PLKKTPTGGV PMTGNLLGGK KKNTEGKLTT AVSHDLADGL 120
  121 AASKMLSGAN QLPESGAAGN VVIRRAATIA VEDTDFDRVE RASILTDMRQ GRVKAPKRRP 180
  181 PSAAINVLGE SNNNSVYVNG SGMSGSGGAG SASELSEDGG AGGKTSDD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [310-438]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSTGEEPQLA KPKPREWEKK KAPWMEELKA SQVTRKKTSP SVEPRGASVA ERTSKLFAAE  60
   61 QAVSSNSSSI TTKVQSSAVT SSMFVENSTT SSSVITSSSH TTTNDAIMSR SLSAAKVQTA 120
  121 SSDEETRAT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [439-545]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RPNSLAIRNQ RSVSPLVKSS NASSSQSQEE KPTSQLNNHQ DASSSRVAQL EQRVDKLEGL  60
   61 VLNQQRTIEE LVNALKSEAE RVKILRSELD KYAHKQTRRG KFDNWMF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle