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View Structure Prediction Details

Protein: CG31012-PD
Organism: Drosophila melanogaster
Length: 635 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG31012-PD.

Description E-value Query
Range
Subject
Range
gi|39579415, gi|... - gi|39579415|emb|CAE56721.1| Hypothetical protein CBG24508 [Caenorhabditis briggsae], gi|187040086|em...
217.0 [0..67] [621..2]

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Predicted Domain #1
Region A:
Residues: [1-66]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPPKPQREF CRVEFPYAPQ NDDELELKVD DIIAVISTEL PDKGWWKGEI RGKVGVFPDN  60
   61 FVKMLA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.0
Match: 2da9A
Description: No description for 2da9A was found.

Predicted Domain #2
Region A:
Residues: [67-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSEVAPINEP PSATQITQNQ RKVSNTASTT SHMTTTNSSN SSTTSVTTQQ QKEQIGGSSS  60
   61 TTSKVYIKKT GSSSNSTTSS TTTASSSAGR KESFGSRDSL NDILSETGLP TGNVAA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [183-433]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QRKSLENKNL DLTKPPGVGA SVSIGQQRSS TSSATTSSAT TVATGLTSSS VSKSMENMLD  60
   61 EKVKSPPPPV LSKKPSVPLK KTPTGGVPMT GNLLGGKKKN TEGKLTTAVS HDLADGLAAS 120
  121 KMLSGANQLP ESGAAGNVVI RRAATIAVED TDFDRVERAS ILTDMRQGRV KAPKRRPPSA 180
  181 AINVLGESNN NSVYVNGSGM SGSGGAGSAS ELSEDGGAGG KTSDDNSTGE EPQLAKPKPR 240
  241 EWEKKKAPWM E

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [434-635]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ELKASQVTRK KTSPSVEPRG ASVAERTSKL FAAEQAVSSN SSSITTKVQS SAVTSSMFVE  60
   61 NSTTSSSVIT SSSHTTTNDA IMSRSLSAAK VQTASSDEET RATRPNSLAI RNQRSVSPLV 120
  121 KSSNASSSQS QEEKPTSQLN NHQDASSSRV AQLEQRVDKL EGLVLNQQRT IEELVNALKS 180
  181 EAERVKILRS ELDKYAQCVT QV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle