YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG9743-PA
Organism: Drosophila melanogaster
Length: 420 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9743-PA.

Description E-value Query
Range
Subject
Range
desat1-PE, desat... - The gene desat1 is referred to in FlyBase by the symbol Dmel\desat1 (CG5887, FBgn0086687). It is a p...
gi|220945722, gi... - gi|220955424|gb|ACL90255.1| desat1-PA [synthetic construct], gi|220945722|gb|ACL85404.1| desat1-PA [...
279.0 [0..58] [416..27]

Back

Predicted Domain #1
Region A:
Residues: [1-136]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCLSSPIPGQ KQATSVGHCN GSCSLDRNGN RSAAIVPNGG ELKHRGHATD ATSHTLVKDD  60
   61 DNLGYKEENA VYKEQQLLQQ QDQTLKEAEQ VEEEEEYHPQ IRWPDLGAQA FLHIGALYGL 120
  121 YQLFYANFYT FLWVVV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [137-345]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TVWVSGIGIT AGAHRLWSHK SYTASLPLRI LLAFAFSIAG QRDAYTWALD HRIHHKFSET  60
   61 DADPHNAKRG FFFAHVGWLF LTPHPKVVAK RKVIDMSDLE ADAVCMFQRK YYIPLFALCS 120
  121 IILPVAVPWY FWNEDLWMSF WINFNMRFTW TLNVAFFVNS VAHMYGNKPY DKNLMSTEAP 180
  181 IVSLLAMGEG WHNYHHVFPW DYKTGEFGN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [346-420]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YSLNITTGFI DFCAWLGLAK GRKSVSPDMV LRRAKKCGDG TRFLDDDHAH KDPVWGFGDK  60
   61 DIPREDIVEL AKMQN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle