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View Structure Prediction Details

Protein: FBpp0311990, CG9...
Organism: Drosophila melanogaster
Length: 461 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0311990, CG9....

Description E-value Query
Range
Subject
Range
gi|125772859, gi... - gi|54637420|gb|EAL26822.1| GA22005-PA [Drosophila pseudoobscura], gi|125772859|ref|XP_001357688.1| G...
277.0 [0..1] [460..1]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGHLSTSERV CSKTPAIATD SSPPLVARRS KFPNGDAQQQ VRRGEDSSPE LPPRGKLQLP  60
   61 PKREELPRSV VPKEIANHVP KDAIDLEEYT RTFVGDRVLG WQFQAP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.30103
Match: 2i96A
Description: No description for 2i96A was found.

Predicted Domain #2
Region A:
Residues: [107-343]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKWDKVIQIS LLHIVAGICL LTYPLRELNP YTTIWSFFVG GVAGFGVTAG AHRFWTHKSY  60
   61 KANTVLRSIL MVCYCVAGQN TLYDWVRDHR VHHKYSETDA DPHNANRGFF FSHVGWLMML 120
  121 KHPEVLRRGR QIDMSDILAD PVVRFHQKYF IPLKTFFCFI LPTVIPVYCW GETWTLAFIQ 180
  181 QCLFRYVSSL NFTWSVNSAA HLWGSRPYDK RIMPSENIYV SLLAMGEGWH NYHHVFP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [344-461]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WDYKAAELGN YTVNFTTMVL DAFHKLGWAW NMKQPSKELV RRTLEKYGDG THASQLGGPE  60
   61 EFKDGVLAGA TMVGHVHYAE VPDPELEYDA ESSSTESAKL DENENEGERM KKSKKAAN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle