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View Structure Prediction Details

Protein: Ef1gamma-PA, Ef1...
Organism: Drosophila melanogaster
Length: 431 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ef1gamma-PA, Ef1....

Description E-value Query
Range
Subject
Range
gi|109105896 - gi|109105896|ref|XP_001118440.1| PREDICTED: eukaryotic translation elongation factor 1 gamma [Macaca...
521.0 [0..1] [431..187]

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Predicted Domain #1
Region A:
Residues: [1-258]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKGTLYTYP ENFRAYKALI AAQYSGAQVK VADNFKFGET NKSAEFLKKF PGGKVPAFET  60
   61 AEGQYLSESN AIAYLLANEQ LRGGKCPFVQ AQVQQWISFA DNEIVPASCA WVFPLLGILP 120
  121 QQKNSTAKQE AEAVLQQLNQ KLQDATFLAG ERITLADIVV FSSLLHLYEY VLEPSVRSAF 180
  181 GNVNRWFVTI LNQKQVQAVV KDYKLCEKAL VFDPKKYAEF QAKTGAAKPQ QQAQQQKQEK 240
  241 KPKEKKEAPK KAAEPAEE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.0
Match: 1ljrA
Description: Class theta GST
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [259-431]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDAADEALAA EPKSKDPFDA LPKGTFNFDD FKRVYSNEDE AKSIPYFFDK FDAENYSIWF  60
   61 GEYKYNEELS KVFMSCNLIT GMFQRLDKMR KAAFASVCLF GEDGNSTISG IWVWRGQDLA 120
  121 FTLSPDWQID YEVYDWKKLD AKSEETKKLV TQYFSWSGTD KDGRKFNQGK IFK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.0
Match: 1pbuA
Description: Elongation factor 1-gamma C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle