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View Structure Prediction Details

Protein: inx3-PA, FBpp030...
Organism: Drosophila melanogaster
Length: 395 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for inx3-PA, FBpp030....

Description E-value Query
Range
Subject
Range
gi|54638486, gi|... - gi|54638486|gb|EAL27888.1| GA13015 [Drosophila pseudoobscura pseudoobscura], gi|125774987|ref|XP_001...
gi|125774987|ref... - GA13015-PA [Drosophila pseudoobscura], GA13015 [Drosophila pseudoobscura pseudoobscura]
457.0 [0..1] [395..1]

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Predicted Domain #1
Region A:
Residues: [1-156]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVFGMVSAV SGFIKIRYLL DKAVIDNMVF RCHYRITTAI LFTCCIIVTA NNLIGDPISC  60
   61 INDGAIPMHV INTFCWITYT YTIPGQQHRQ IGTDVAGPGL GNEYGQEKRY HSYYQWVPFV 120
  121 LFFQGLMFYV PHWVWKNMED GKIRMITDGL RGMVSV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [157-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDDYRRDRQD RILKYFVNSL NTHNGYSFAY FFCELLNFIN VIVNIFMVDK FLGGAFMSYG  60
   61 TDVLKFSNMD QDKRFDPMIE IFPRLTKCTF HKFGPSGSVQ KHDTLCVLAL NILNEKIYIF 120
  121 LWFWFIILAT ISGVAVLYSL VVIMMPTTRE TIIKRSYRSA QRKEIAGLVR RLEIGDFLIL 180
  181 HFLSQNLSTR SYSDMLQQLC GLLGASRTPS APSTLEMNRI SHPIYPPVET FGGGKETET

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle